Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SSSCA1O60232 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SSSCA1O60232 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SSSCA1O60232 HCG11-201ENST00000411553 5696 ntBASIC16.62■□□□□ 0.25
SSSCA1O60232 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.62■□□□□ 0.25
SSSCA1O60232 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SSSCA1O60232 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SSSCA1O60232 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SSSCA1O60232 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
SSSCA1O60232 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SSSCA1O60232 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SSSCA1O60232 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC16.62■□□□□ 0.25
SSSCA1O60232 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SSSCA1O60232 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC16.62■□□□□ 0.25
SSSCA1O60232 SMUG1P1-201ENST00000590640 811 ntBASIC16.62■□□□□ 0.25
SSSCA1O60232 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SSSCA1O60232 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SSSCA1O60232 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SSSCA1O60232 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SSSCA1O60232 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC16.62■□□□□ 0.25
SSSCA1O60232 EXOC3-AS1-202ENST00000623673 1663 ntBASIC16.62■□□□□ 0.25
SSSCA1O60232 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
SSSCA1O60232 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC16.62■□□□□ 0.25
SSSCA1O60232 ASL-203ENST00000380839 1765 ntTSL 5 BASIC16.61■□□□□ 0.25
SSSCA1O60232 BX323043.1-201ENST00000641006 1765 ntBASIC16.61■□□□□ 0.25
SSSCA1O60232 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SSSCA1O60232 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SSSCA1O60232 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC16.61■□□□□ 0.25
SSSCA1O60232 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SSSCA1O60232 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSSCA1O60232 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSSCA1O60232 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC16.61■□□□□ 0.25
SSSCA1O60232 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SSSCA1O60232 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSSCA1O60232 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SSSCA1O60232 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SSSCA1O60232 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC16.61■□□□□ 0.25
SSSCA1O60232 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SSSCA1O60232 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SSSCA1O60232 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSSCA1O60232 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SSSCA1O60232 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSSCA1O60232 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SSSCA1O60232 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSSCA1O60232 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC16.61■□□□□ 0.25
SSSCA1O60232 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSSCA1O60232 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSSCA1O60232 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
SSSCA1O60232 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSSCA1O60232 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SSSCA1O60232 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSSCA1O60232 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC16.6■□□□□ 0.25
SSSCA1O60232 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SSSCA1O60232 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SSSCA1O60232 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSSCA1O60232 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSSCA1O60232 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSSCA1O60232 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SSSCA1O60232 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSSCA1O60232 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSSCA1O60232 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSSCA1O60232 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SSSCA1O60232 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SSSCA1O60232 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC16.6■□□□□ 0.25
SSSCA1O60232 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC16.6■□□□□ 0.25
SSSCA1O60232 RASSF1-AS1-201ENST00000629828 790 ntBASIC16.6■□□□□ 0.25
SSSCA1O60232 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
SSSCA1O60232 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SSSCA1O60232 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSSCA1O60232 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSSCA1O60232 AL158211.5-201ENST00000623583 2518 ntBASIC16.6■□□□□ 0.25
SSSCA1O60232 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC16.6■□□□□ 0.25
SSSCA1O60232 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSSCA1O60232 SYT6-210ENST00000641643 1587 ntBASIC16.6■□□□□ 0.25
SSSCA1O60232 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.6■□□□□ 0.25
SSSCA1O60232 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
SSSCA1O60232 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSSCA1O60232 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
SSSCA1O60232 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SSSCA1O60232 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
SSSCA1O60232 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSSCA1O60232 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSSCA1O60232 SERBP1P1-201ENST00000396021 1160 ntBASIC16.59■□□□□ 0.25
SSSCA1O60232 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC16.59■□□□□ 0.25
SSSCA1O60232 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC16.59■□□□□ 0.25
SSSCA1O60232 AC120498.9-201ENST00000339021 3867 ntBASIC16.59■□□□□ 0.25
SSSCA1O60232 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SSSCA1O60232 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SSSCA1O60232 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC16.59■□□□□ 0.25
SSSCA1O60232 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSSCA1O60232 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SSSCA1O60232 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SSSCA1O60232 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SSSCA1O60232 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SSSCA1O60232 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC16.58■□□□□ 0.24
SSSCA1O60232 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC16.58■□□□□ 0.24
SSSCA1O60232 AL138724.1-201ENST00000606771 1088 ntBASIC16.58■□□□□ 0.24
SSSCA1O60232 AC136469.2-201ENST00000623944 1028 ntBASIC16.58■□□□□ 0.24
SSSCA1O60232 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC16.58■□□□□ 0.24
SSSCA1O60232 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms