Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.23■□□□□ 0.99
MSI1O43347 KRT18P6-201ENST00000555540 1265 ntBASIC21.23■□□□□ 0.99
MSI1O43347 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.23■□□□□ 0.99
MSI1O43347 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.23■□□□□ 0.99
MSI1O43347 AC006128.1-201ENST00000624704 1661 ntBASIC21.23■□□□□ 0.99
MSI1O43347 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
MSI1O43347 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
MSI1O43347 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
MSI1O43347 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
MSI1O43347 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
MSI1O43347 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.23■□□□□ 0.99
MSI1O43347 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
MSI1O43347 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.22■□□□□ 0.99
MSI1O43347 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
MSI1O43347 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.22■□□□□ 0.99
MSI1O43347 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
MSI1O43347 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
MSI1O43347 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
MSI1O43347 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
MSI1O43347 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
MSI1O43347 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.22■□□□□ 0.99
MSI1O43347 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.22■□□□□ 0.99
MSI1O43347 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
MSI1O43347 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.22■□□□□ 0.99
MSI1O43347 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.22■□□□□ 0.99
MSI1O43347 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
MSI1O43347 AL121603.2-201ENST00000557373 2117 ntBASIC21.22■□□□□ 0.99
MSI1O43347 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
MSI1O43347 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MSI1O43347 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MSI1O43347 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
MSI1O43347 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MSI1O43347 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MSI1O43347 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
MSI1O43347 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.21■□□□□ 0.99
MSI1O43347 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
MSI1O43347 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.21■□□□□ 0.99
MSI1O43347 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
MSI1O43347 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
MSI1O43347 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.21■□□□□ 0.99
MSI1O43347 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
MSI1O43347 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
MSI1O43347 MIR2861-201ENST00000636310 90 ntBASIC21.21■□□□□ 0.99
MSI1O43347 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
MSI1O43347 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.21■□□□□ 0.99
MSI1O43347 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
MSI1O43347 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
MSI1O43347 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MSI1O43347 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MSI1O43347 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MSI1O43347 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.21■□□□□ 0.99
MSI1O43347 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MSI1O43347 FP700111.2-201ENST00000619190 1892 ntBASIC21.2■□□□□ 0.98
MSI1O43347 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MSI1O43347 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.2■□□□□ 0.98
MSI1O43347 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
MSI1O43347 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
MSI1O43347 PGM5P4-201ENST00000421970 445 ntBASIC21.2■□□□□ 0.98
MSI1O43347 CD99P1-205ENST00000527459 561 ntBASIC21.2■□□□□ 0.98
MSI1O43347 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
MSI1O43347 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
MSI1O43347 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MSI1O43347 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
MSI1O43347 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MSI1O43347 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MSI1O43347 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
MSI1O43347 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
MSI1O43347 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.2■□□□□ 0.98
MSI1O43347 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
MSI1O43347 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
MSI1O43347 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
MSI1O43347 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.19■□□□□ 0.98
MSI1O43347 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.19■□□□□ 0.98
MSI1O43347 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
MSI1O43347 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.19■□□□□ 0.98
MSI1O43347 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.19■□□□□ 0.98
MSI1O43347 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
MSI1O43347 RNA5SP413-201ENST00000516373 109 ntBASIC21.19■□□□□ 0.98
MSI1O43347 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.19■□□□□ 0.98
MSI1O43347 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
MSI1O43347 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
MSI1O43347 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MSI1O43347 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.19■□□□□ 0.98
MSI1O43347 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.19■□□□□ 0.98
MSI1O43347 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MSI1O43347 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
MSI1O43347 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.18■□□□□ 0.98
MSI1O43347 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
MSI1O43347 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.18■□□□□ 0.98
MSI1O43347 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.18■□□□□ 0.98
MSI1O43347 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.18■□□□□ 0.98
MSI1O43347 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
MSI1O43347 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MSI1O43347 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.18■□□□□ 0.98
MSI1O43347 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MSI1O43347 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.18■□□□□ 0.98
MSI1O43347 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
MSI1O43347 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MSI1O43347 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MSI1O43347 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms