Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMAD9O15198 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMAD9O15198 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMAD9O15198 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMAD9O15198 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.48■□□□□ 0.55
SMAD9O15198 AL162412.1-201ENST00000567129 965 ntBASIC18.48■□□□□ 0.55
SMAD9O15198 AL050303.2-201ENST00000619798 666 ntBASIC18.48■□□□□ 0.55
SMAD9O15198 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMAD9O15198 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SMAD9O15198 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.48■□□□□ 0.55
SMAD9O15198 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SMAD9O15198 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMAD9O15198 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SMAD9O15198 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMAD9O15198 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
SMAD9O15198 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.47■□□□□ 0.55
SMAD9O15198 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMAD9O15198 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SMAD9O15198 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.47■□□□□ 0.55
SMAD9O15198 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.47■□□□□ 0.55
SMAD9O15198 AC016405.3-201ENST00000607710 860 ntBASIC18.47■□□□□ 0.55
SMAD9O15198 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.47■□□□□ 0.55
SMAD9O15198 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMAD9O15198 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.47■□□□□ 0.55
SMAD9O15198 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMAD9O15198 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
SMAD9O15198 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SMAD9O15198 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SMAD9O15198 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SMAD9O15198 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMAD9O15198 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SMAD9O15198 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.47■□□□□ 0.55
SMAD9O15198 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.46■□□□□ 0.55
SMAD9O15198 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.46■□□□□ 0.55
SMAD9O15198 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SMAD9O15198 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.46■□□□□ 0.55
SMAD9O15198 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
SMAD9O15198 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
SMAD9O15198 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.46■□□□□ 0.55
SMAD9O15198 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.46■□□□□ 0.55
SMAD9O15198 AC116050.2-201ENST00000612102 1779 ntBASIC18.46■□□□□ 0.55
SMAD9O15198 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SMAD9O15198 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SMAD9O15198 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SMAD9O15198 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SMAD9O15198 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
SMAD9O15198 AC006970.2-201ENST00000450065 779 ntBASIC18.46■□□□□ 0.55
SMAD9O15198 CDV3P1-201ENST00000471403 739 ntBASIC18.46■□□□□ 0.55
SMAD9O15198 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.46■□□□□ 0.55
SMAD9O15198 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
SMAD9O15198 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.46■□□□□ 0.55
SMAD9O15198 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.46■□□□□ 0.55
SMAD9O15198 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SMAD9O15198 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
SMAD9O15198 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SMAD9O15198 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SMAD9O15198 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SMAD9O15198 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.46■□□□□ 0.55
SMAD9O15198 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.46■□□□□ 0.55
SMAD9O15198 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
SMAD9O15198 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMAD9O15198 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMAD9O15198 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMAD9O15198 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMAD9O15198 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.45■□□□□ 0.54
SMAD9O15198 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
SMAD9O15198 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.45■□□□□ 0.54
SMAD9O15198 AC007322.3-201ENST00000426526 701 ntBASIC18.45■□□□□ 0.54
SMAD9O15198 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
SMAD9O15198 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.45■□□□□ 0.54
SMAD9O15198 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SMAD9O15198 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.45■□□□□ 0.54
SMAD9O15198 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMAD9O15198 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMAD9O15198 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMAD9O15198 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SMAD9O15198 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMAD9O15198 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.45■□□□□ 0.54
SMAD9O15198 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMAD9O15198 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SMAD9O15198 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
SMAD9O15198 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.44■□□□□ 0.54
SMAD9O15198 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SMAD9O15198 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SMAD9O15198 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SMAD9O15198 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SMAD9O15198 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
SMAD9O15198 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.44■□□□□ 0.54
SMAD9O15198 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
SMAD9O15198 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.44■□□□□ 0.54
SMAD9O15198 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.44■□□□□ 0.54
SMAD9O15198 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.44■□□□□ 0.54
SMAD9O15198 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SMAD9O15198 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SMAD9O15198 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
SMAD9O15198 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SMAD9O15198 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.43■□□□□ 0.54
SMAD9O15198 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
SMAD9O15198 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
SMAD9O15198 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms