Protein–RNA interactions for Protein: O15016

TRIM66, Tripartite motif-containing protein 66, humanhuman

Predictions only

Length 1,216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM66O15016 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
TRIM66O15016 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TRIM66O15016 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
TRIM66O15016 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
TRIM66O15016 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TRIM66O15016 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TRIM66O15016 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TRIM66O15016 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC22.04■■□□□ 1.12
TRIM66O15016 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
TRIM66O15016 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC22.04■■□□□ 1.12
TRIM66O15016 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
TRIM66O15016 METTL15-202ENST00000403099 795 ntTSL 5 BASIC22.04■■□□□ 1.12
TRIM66O15016 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
TRIM66O15016 AF201337.1-201ENST00000520239 748 ntBASIC22.04■■□□□ 1.12
TRIM66O15016 AL162412.1-201ENST00000567129 965 ntBASIC22.04■■□□□ 1.12
TRIM66O15016 PLLP-204ENST00000569059 665 ntTSL 3 BASIC22.04■■□□□ 1.12
TRIM66O15016 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TRIM66O15016 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC22.04■■□□□ 1.12
TRIM66O15016 AL591742.1-201ENST00000604433 565 ntBASIC22.04■■□□□ 1.12
TRIM66O15016 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC22.04■■□□□ 1.12
TRIM66O15016 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
TRIM66O15016 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TRIM66O15016 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
TRIM66O15016 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TRIM66O15016 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC22.04■■□□□ 1.12
TRIM66O15016 ME2-206ENST00000638410 2289 ntTSL 5 BASIC22.04■■□□□ 1.12
TRIM66O15016 ME2-210ENST00000639255 2262 ntTSL 5 BASIC22.04■■□□□ 1.12
TRIM66O15016 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TRIM66O15016 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TRIM66O15016 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC22.04■■□□□ 1.12
TRIM66O15016 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRIM66O15016 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRIM66O15016 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
TRIM66O15016 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRIM66O15016 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRIM66O15016 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC22.03■■□□□ 1.12
TRIM66O15016 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRIM66O15016 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRIM66O15016 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRIM66O15016 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRIM66O15016 CD44-222ENST00000526025 1052 ntTSL 2 BASIC22.03■■□□□ 1.12
TRIM66O15016 AC069236.1-201ENST00000604339 616 ntBASIC22.03■■□□□ 1.12
TRIM66O15016 AC008694.1-202ENST00000636953 945 ntBASIC22.03■■□□□ 1.12
TRIM66O15016 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TRIM66O15016 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TRIM66O15016 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRIM66O15016 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
TRIM66O15016 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
TRIM66O15016 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TRIM66O15016 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TRIM66O15016 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TRIM66O15016 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC22.02■■□□□ 1.12
TRIM66O15016 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC22.02■■□□□ 1.12
TRIM66O15016 TSPY6P-201ENST00000448518 926 ntBASIC22.02■■□□□ 1.12
TRIM66O15016 AC105036.2-201ENST00000569468 176 ntBASIC22.02■■□□□ 1.12
TRIM66O15016 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC22.02■■□□□ 1.12
TRIM66O15016 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
TRIM66O15016 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC22.02■■□□□ 1.12
TRIM66O15016 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TRIM66O15016 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TRIM66O15016 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC22.02■■□□□ 1.11
TRIM66O15016 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC22.02■■□□□ 1.11
TRIM66O15016 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
TRIM66O15016 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TRIM66O15016 LINC01006-201ENST00000333319 2292 ntBASIC22.01■■□□□ 1.11
TRIM66O15016 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
TRIM66O15016 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC22.01■■□□□ 1.11
TRIM66O15016 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TRIM66O15016 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TRIM66O15016 MFF-203ENST00000349901 1716 ntTSL 2 BASIC22.01■■□□□ 1.11
TRIM66O15016 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
TRIM66O15016 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TRIM66O15016 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
TRIM66O15016 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC22.01■■□□□ 1.11
TRIM66O15016 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC22.01■■□□□ 1.11
TRIM66O15016 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC22.01■■□□□ 1.11
TRIM66O15016 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
TRIM66O15016 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
TRIM66O15016 OR10C1-204ENST00000622521 1039 ntBASIC22.01■■□□□ 1.11
TRIM66O15016 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC22.01■■□□□ 1.11
TRIM66O15016 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC22.01■■□□□ 1.11
TRIM66O15016 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC22.01■■□□□ 1.11
TRIM66O15016 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC22.01■■□□□ 1.11
TRIM66O15016 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
TRIM66O15016 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
TRIM66O15016 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC22■■□□□ 1.11
TRIM66O15016 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC22■■□□□ 1.11
TRIM66O15016 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TRIM66O15016 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC22■■□□□ 1.11
TRIM66O15016 SLC29A4P1-201ENST00000398760 971 ntBASIC22■■□□□ 1.11
TRIM66O15016 AL355802.2-201ENST00000402069 882 ntBASIC22■■□□□ 1.11
TRIM66O15016 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC22■■□□□ 1.11
TRIM66O15016 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC22■■□□□ 1.11
TRIM66O15016 EMC9-206ENST00000560403 872 ntTSL 2 BASIC22■■□□□ 1.11
TRIM66O15016 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC22■■□□□ 1.11
TRIM66O15016 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC22■■□□□ 1.11
TRIM66O15016 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TRIM66O15016 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TRIM66O15016 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
TRIM66O15016 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.99■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms