Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
UPK2O00526 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC16.37■□□□□ 0.21
UPK2O00526 ME2-218ENST00000640965 2476 ntTSL 5 BASIC16.37■□□□□ 0.21
UPK2O00526 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UPK2O00526 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UPK2O00526 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
UPK2O00526 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UPK2O00526 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
UPK2O00526 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC16.37■□□□□ 0.21
UPK2O00526 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC16.37■□□□□ 0.21
UPK2O00526 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC16.37■□□□□ 0.21
UPK2O00526 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC16.37■□□□□ 0.21
UPK2O00526 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC16.37■□□□□ 0.21
UPK2O00526 SLC7A5P1-201ENST00000568957 537 ntBASIC16.37■□□□□ 0.21
UPK2O00526 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC16.37■□□□□ 0.21
UPK2O00526 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC16.37■□□□□ 0.21
UPK2O00526 FGF8-207ENST00000618991 856 ntTSL 3 BASIC16.37■□□□□ 0.21
UPK2O00526 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC16.37■□□□□ 0.21
UPK2O00526 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC16.37■□□□□ 0.21
UPK2O00526 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UPK2O00526 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
UPK2O00526 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC16.37■□□□□ 0.21
UPK2O00526 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UPK2O00526 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
UPK2O00526 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UPK2O00526 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UPK2O00526 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
UPK2O00526 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
UPK2O00526 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC16.36■□□□□ 0.21
UPK2O00526 AC004854.2-201ENST00000608450 1441 ntBASIC16.36■□□□□ 0.21
UPK2O00526 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
UPK2O00526 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
UPK2O00526 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
UPK2O00526 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC16.36■□□□□ 0.21
UPK2O00526 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
UPK2O00526 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC16.36■□□□□ 0.21
UPK2O00526 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
UPK2O00526 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
UPK2O00526 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
UPK2O00526 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC16.36■□□□□ 0.21
UPK2O00526 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
UPK2O00526 AC091799.1-201ENST00000422823 811 ntBASIC16.36■□□□□ 0.21
UPK2O00526 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC16.36■□□□□ 0.21
UPK2O00526 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
UPK2O00526 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC16.36■□□□□ 0.21
UPK2O00526 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC16.36■□□□□ 0.21
UPK2O00526 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
UPK2O00526 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC16.36■□□□□ 0.21
UPK2O00526 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC16.36■□□□□ 0.21
UPK2O00526 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
UPK2O00526 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
UPK2O00526 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
UPK2O00526 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC16.36■□□□□ 0.21
UPK2O00526 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
UPK2O00526 RBM17P2-201ENST00000616397 1405 ntBASIC16.36■□□□□ 0.21
UPK2O00526 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
UPK2O00526 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC16.36■□□□□ 0.21
UPK2O00526 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
UPK2O00526 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
UPK2O00526 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
UPK2O00526 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UPK2O00526 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC16.35■□□□□ 0.21
UPK2O00526 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC16.35■□□□□ 0.21
UPK2O00526 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
UPK2O00526 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC16.35■□□□□ 0.21
UPK2O00526 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC16.35■□□□□ 0.21
UPK2O00526 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UPK2O00526 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
UPK2O00526 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UPK2O00526 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UPK2O00526 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UPK2O00526 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
UPK2O00526 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
UPK2O00526 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UPK2O00526 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
UPK2O00526 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
UPK2O00526 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC16.35■□□□□ 0.21
UPK2O00526 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
UPK2O00526 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC16.35■□□□□ 0.21
UPK2O00526 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
UPK2O00526 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
UPK2O00526 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
UPK2O00526 PCDHAC2-203ENST00000615316 3011 ntBASIC16.35■□□□□ 0.21
UPK2O00526 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
UPK2O00526 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
UPK2O00526 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UPK2O00526 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UPK2O00526 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
UPK2O00526 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
UPK2O00526 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
UPK2O00526 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
UPK2O00526 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UPK2O00526 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC16.34■□□□□ 0.21
UPK2O00526 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UPK2O00526 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
UPK2O00526 AC007322.3-201ENST00000426526 701 ntBASIC16.34■□□□□ 0.21
UPK2O00526 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC16.34■□□□□ 0.21
UPK2O00526 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC16.34■□□□□ 0.21
UPK2O00526 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC16.34■□□□□ 0.21
UPK2O00526 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms