Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.48■□□□□ 0.71
RTCAO00442 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.48■□□□□ 0.71
RTCAO00442 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.48■□□□□ 0.71
RTCAO00442 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.48■□□□□ 0.71
RTCAO00442 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.48■□□□□ 0.71
RTCAO00442 AC092666.2-201ENST00000613287 246 ntBASIC19.48■□□□□ 0.71
RTCAO00442 AC231657.2-201ENST00000624556 255 ntBASIC19.48■□□□□ 0.71
RTCAO00442 MIR2861-201ENST00000636310 90 ntBASIC19.48■□□□□ 0.71
RTCAO00442 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RTCAO00442 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.48■□□□□ 0.71
RTCAO00442 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RTCAO00442 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.48■□□□□ 0.71
RTCAO00442 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.48■□□□□ 0.71
RTCAO00442 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RTCAO00442 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RTCAO00442 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.48■□□□□ 0.71
RTCAO00442 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RTCAO00442 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RTCAO00442 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RTCAO00442 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RTCAO00442 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RTCAO00442 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RTCAO00442 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RTCAO00442 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RTCAO00442 AP005212.1-201ENST00000581547 1997 ntBASIC19.47■□□□□ 0.71
RTCAO00442 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RTCAO00442 CYP2T1P-201ENST00000432607 1285 ntBASIC19.47■□□□□ 0.71
RTCAO00442 CDCA4P2-201ENST00000441182 718 ntBASIC19.47■□□□□ 0.71
RTCAO00442 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.47■□□□□ 0.71
RTCAO00442 FAM21FP-204ENST00000608637 956 ntBASIC19.47■□□□□ 0.71
RTCAO00442 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
RTCAO00442 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
RTCAO00442 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.47■□□□□ 0.71
RTCAO00442 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RTCAO00442 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RTCAO00442 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RTCAO00442 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.47■□□□□ 0.71
RTCAO00442 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
RTCAO00442 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
RTCAO00442 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RTCAO00442 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RTCAO00442 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RTCAO00442 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.46■□□□□ 0.71
RTCAO00442 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RTCAO00442 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RTCAO00442 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTCAO00442 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RTCAO00442 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.46■□□□□ 0.71
RTCAO00442 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
RTCAO00442 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.46■□□□□ 0.71
RTCAO00442 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.46■□□□□ 0.71
RTCAO00442 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.46■□□□□ 0.71
RTCAO00442 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTCAO00442 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RTCAO00442 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
RTCAO00442 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.46■□□□□ 0.71
RTCAO00442 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
RTCAO00442 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.46■□□□□ 0.71
RTCAO00442 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTCAO00442 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.46■□□□□ 0.71
RTCAO00442 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RTCAO00442 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RTCAO00442 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTCAO00442 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
RTCAO00442 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.45■□□□□ 0.7
RTCAO00442 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.45■□□□□ 0.7
RTCAO00442 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.45■□□□□ 0.7
RTCAO00442 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
RTCAO00442 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTCAO00442 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTCAO00442 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.45■□□□□ 0.7
RTCAO00442 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.45■□□□□ 0.7
RTCAO00442 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTCAO00442 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.45■□□□□ 0.7
RTCAO00442 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTCAO00442 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTCAO00442 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
RTCAO00442 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTCAO00442 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RTCAO00442 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.44■□□□□ 0.7
RTCAO00442 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RTCAO00442 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.44■□□□□ 0.7
RTCAO00442 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTCAO00442 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.44■□□□□ 0.7
RTCAO00442 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RTCAO00442 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTCAO00442 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTCAO00442 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.44■□□□□ 0.7
RTCAO00442 RARRES2P4-201ENST00000514074 484 ntBASIC19.44■□□□□ 0.7
RTCAO00442 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.44■□□□□ 0.7
RTCAO00442 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.44■□□□□ 0.7
RTCAO00442 AL162412.1-201ENST00000567129 965 ntBASIC19.44■□□□□ 0.7
RTCAO00442 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RTCAO00442 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.44■□□□□ 0.7
RTCAO00442 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RTCAO00442 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.44■□□□□ 0.7
RTCAO00442 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTCAO00442 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
RTCAO00442 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RTCAO00442 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms