Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UPK1AO00322 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UPK1AO00322 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UPK1AO00322 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
UPK1AO00322 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
UPK1AO00322 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.36■□□□□ 0.69
UPK1AO00322 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.36■□□□□ 0.69
UPK1AO00322 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.36■□□□□ 0.69
UPK1AO00322 SLC7A5P1-201ENST00000568957 537 ntBASIC19.36■□□□□ 0.69
UPK1AO00322 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.36■□□□□ 0.69
UPK1AO00322 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
UPK1AO00322 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UPK1AO00322 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
UPK1AO00322 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UPK1AO00322 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
UPK1AO00322 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UPK1AO00322 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
UPK1AO00322 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UPK1AO00322 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.35■□□□□ 0.69
UPK1AO00322 KRT18P5-201ENST00000436075 1291 ntBASIC19.35■□□□□ 0.69
UPK1AO00322 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.35■□□□□ 0.69
UPK1AO00322 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.35■□□□□ 0.69
UPK1AO00322 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.35■□□□□ 0.69
UPK1AO00322 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.35■□□□□ 0.69
UPK1AO00322 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
UPK1AO00322 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.35■□□□□ 0.69
UPK1AO00322 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UPK1AO00322 AC099778.1-201ENST00000568593 1911 ntBASIC19.35■□□□□ 0.69
UPK1AO00322 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UPK1AO00322 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.35■□□□□ 0.69
UPK1AO00322 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.34■□□□□ 0.69
UPK1AO00322 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UPK1AO00322 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UPK1AO00322 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UPK1AO00322 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.34■□□□□ 0.69
UPK1AO00322 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UPK1AO00322 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
UPK1AO00322 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
UPK1AO00322 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UPK1AO00322 AC011484.1-201ENST00000377652 1995 ntBASIC19.34■□□□□ 0.69
UPK1AO00322 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
UPK1AO00322 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UPK1AO00322 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
UPK1AO00322 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.34■□□□□ 0.69
UPK1AO00322 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.34■□□□□ 0.69
UPK1AO00322 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.34■□□□□ 0.69
UPK1AO00322 UBE2DNL-204ENST00000602536 740 ntBASIC19.34■□□□□ 0.69
UPK1AO00322 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.34■□□□□ 0.69
UPK1AO00322 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
UPK1AO00322 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UPK1AO00322 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
UPK1AO00322 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
UPK1AO00322 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.34■□□□□ 0.69
UPK1AO00322 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UPK1AO00322 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.33■□□□□ 0.69
UPK1AO00322 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
UPK1AO00322 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
UPK1AO00322 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
UPK1AO00322 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
UPK1AO00322 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.33■□□□□ 0.68
UPK1AO00322 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.33■□□□□ 0.68
UPK1AO00322 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
UPK1AO00322 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
UPK1AO00322 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
UPK1AO00322 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
UPK1AO00322 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.33■□□□□ 0.68
UPK1AO00322 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
UPK1AO00322 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
UPK1AO00322 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
UPK1AO00322 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.32■□□□□ 0.68
UPK1AO00322 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
UPK1AO00322 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UPK1AO00322 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UPK1AO00322 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
UPK1AO00322 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UPK1AO00322 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
UPK1AO00322 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.32■□□□□ 0.68
UPK1AO00322 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UPK1AO00322 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
UPK1AO00322 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.32■□□□□ 0.68
UPK1AO00322 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UPK1AO00322 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UPK1AO00322 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.32■□□□□ 0.68
UPK1AO00322 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
UPK1AO00322 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.32■□□□□ 0.68
UPK1AO00322 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.32■□□□□ 0.68
UPK1AO00322 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UPK1AO00322 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UPK1AO00322 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.32■□□□□ 0.68
UPK1AO00322 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UPK1AO00322 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.32■□□□□ 0.68
UPK1AO00322 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
UPK1AO00322 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
UPK1AO00322 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UPK1AO00322 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UPK1AO00322 RBM17P2-201ENST00000616397 1405 ntBASIC19.32■□□□□ 0.68
UPK1AO00322 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UPK1AO00322 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UPK1AO00322 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.31■□□□□ 0.68
UPK1AO00322 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms