Protein–RNA interactions for Protein: B2RD01

CENPBD1, CENPB DNA-binding domain-containing protein 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPBD1B2RD01 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CENPBD1B2RD01 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CENPBD1B2RD01 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CENPBD1B2RD01 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CENPBD1B2RD01 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CENPBD1B2RD01 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.53■□□□□ 0.56
CENPBD1B2RD01 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.53■□□□□ 0.56
CENPBD1B2RD01 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.53■□□□□ 0.56
CENPBD1B2RD01 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CENPBD1B2RD01 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CENPBD1B2RD01 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CENPBD1B2RD01 BX323043.1-201ENST00000641006 1765 ntBASIC18.53■□□□□ 0.56
CENPBD1B2RD01 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CENPBD1B2RD01 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CENPBD1B2RD01 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.52■□□□□ 0.56
CENPBD1B2RD01 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CENPBD1B2RD01 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CENPBD1B2RD01 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CENPBD1B2RD01 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CENPBD1B2RD01 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.52■□□□□ 0.56
CENPBD1B2RD01 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.52■□□□□ 0.56
CENPBD1B2RD01 AC006128.1-201ENST00000624704 1661 ntBASIC18.52■□□□□ 0.56
CENPBD1B2RD01 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.52■□□□□ 0.56
CENPBD1B2RD01 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CENPBD1B2RD01 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CENPBD1B2RD01 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CENPBD1B2RD01 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
CENPBD1B2RD01 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
CENPBD1B2RD01 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.52■□□□□ 0.55
CENPBD1B2RD01 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CENPBD1B2RD01 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CENPBD1B2RD01 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CENPBD1B2RD01 AC061975.6-201ENST00000579045 1553 ntBASIC18.51■□□□□ 0.55
CENPBD1B2RD01 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CENPBD1B2RD01 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CENPBD1B2RD01 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CENPBD1B2RD01 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.51■□□□□ 0.55
CENPBD1B2RD01 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
CENPBD1B2RD01 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.51■□□□□ 0.55
CENPBD1B2RD01 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.51■□□□□ 0.55
CENPBD1B2RD01 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.51■□□□□ 0.55
CENPBD1B2RD01 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CENPBD1B2RD01 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CENPBD1B2RD01 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CENPBD1B2RD01 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CENPBD1B2RD01 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.51■□□□□ 0.55
CENPBD1B2RD01 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
CENPBD1B2RD01 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CENPBD1B2RD01 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CENPBD1B2RD01 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CENPBD1B2RD01 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CENPBD1B2RD01 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.51■□□□□ 0.55
CENPBD1B2RD01 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CENPBD1B2RD01 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CENPBD1B2RD01 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CENPBD1B2RD01 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.5■□□□□ 0.55
CENPBD1B2RD01 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CENPBD1B2RD01 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CENPBD1B2RD01 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CENPBD1B2RD01 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CENPBD1B2RD01 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CENPBD1B2RD01 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CENPBD1B2RD01 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.5■□□□□ 0.55
CENPBD1B2RD01 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CENPBD1B2RD01 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
CENPBD1B2RD01 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CENPBD1B2RD01 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CENPBD1B2RD01 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CENPBD1B2RD01 AC097381.1-201ENST00000429019 1296 ntBASIC18.5■□□□□ 0.55
CENPBD1B2RD01 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.5■□□□□ 0.55
CENPBD1B2RD01 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.5■□□□□ 0.55
CENPBD1B2RD01 AC104187.1-201ENST00000607510 612 ntBASIC18.5■□□□□ 0.55
CENPBD1B2RD01 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CENPBD1B2RD01 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CENPBD1B2RD01 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CENPBD1B2RD01 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CENPBD1B2RD01 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.5■□□□□ 0.55
CENPBD1B2RD01 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CENPBD1B2RD01 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CENPBD1B2RD01 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.5■□□□□ 0.55
CENPBD1B2RD01 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CENPBD1B2RD01 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CENPBD1B2RD01 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.49■□□□□ 0.55
CENPBD1B2RD01 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CENPBD1B2RD01 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CENPBD1B2RD01 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
CENPBD1B2RD01 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.49■□□□□ 0.55
CENPBD1B2RD01 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CENPBD1B2RD01 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CENPBD1B2RD01 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CENPBD1B2RD01 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.49■□□□□ 0.55
CENPBD1B2RD01 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.49■□□□□ 0.55
CENPBD1B2RD01 KRT19P1-201ENST00000405746 1186 ntBASIC18.49■□□□□ 0.55
CENPBD1B2RD01 SLC7A5P1-201ENST00000568957 537 ntBASIC18.49■□□□□ 0.55
CENPBD1B2RD01 AP001160.3-201ENST00000601484 763 ntBASIC18.49■□□□□ 0.55
CENPBD1B2RD01 MIR6821-201ENST00000617625 74 ntBASIC18.49■□□□□ 0.55
CENPBD1B2RD01 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.49■□□□□ 0.55
CENPBD1B2RD01 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CENPBD1B2RD01 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CENPBD1B2RD01 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms