Protein–RNA interactions for Protein: A0A0B7P3V8

TY4B-P, Transposon Ty4-P Gag-Pol polyprotein, yeast

Predictions only

Length 1,104 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
TY4B-P	A0A0B7P3V8	VPS55	YJR044C	423 nt		3.69	□□□□□ -1.82
TY4B-P	A0A0B7P3V8	CYB5	YNL111C	363 nt		3.69	□□□□□ -1.82
TY4B-P	A0A0B7P3V8	CDH1	YGL003C	1701 nt		3.69	□□□□□ -1.82
TY4B-P	A0A0B7P3V8	MYO5	YMR109W	3660 nt		3.69	□□□□□ -1.82
TY4B-P	A0A0B7P3V8	USA1	YML029W	2517 nt		3.69	□□□□□ -1.82
TY4B-P	A0A0B7P3V8	OSH3	YHR073W	2991 nt		3.69	□□□□□ -1.82
TY4B-P	A0A0B7P3V8	JEN1	YKL217W	1851 nt		3.69	□□□□□ -1.82
TY4B-P	A0A0B7P3V8	MSH2	YOL090W	2895 nt		3.69	□□□□□ -1.82
TY4B-P	A0A0B7P3V8	ROM1	YGR070W	3468 nt		3.68	□□□□□ -1.82
TY4B-P	A0A0B7P3V8	RED1	YLR263W	2484 nt		3.68	□□□□□ -1.82
TY4B-P	A0A0B7P3V8	RSC1	YGR056W	2787 nt		3.68	□□□□□ -1.82
TY4B-P	A0A0B7P3V8	YHR032C-A	YHR032C-A	120 nt		3.68	□□□□□ -1.82
TY4B-P	A0A0B7P3V8	YPL182C	YPL182C	384 nt		3.68	□□□□□ -1.82
TY4B-P	A0A0B7P3V8	ARO80	YDR421W	2853 nt		3.68	□□□□□ -1.82
TY4B-P	A0A0B7P3V8	DOA4	YDR069C	2781 nt		3.68	□□□□□ -1.82
TY4B-P	A0A0B7P3V8	MSS11	YMR164C	2277 nt		3.67	□□□□□ -1.82
TY4B-P	A0A0B7P3V8	HPA3	YEL066W	540 nt		3.67	□□□□□ -1.82
TY4B-P	A0A0B7P3V8	VPS3	YDR495C	3036 nt		3.67	□□□□□ -1.82
TY4B-P	A0A0B7P3V8	FAT1	YBR041W	2010 nt		3.66	□□□□□ -1.82
TY4B-P	A0A0B7P3V8	SIZ1	YDR409W	2715 nt		3.66	□□□□□ -1.82
TY4B-P	A0A0B7P3V8	OLI1	Q0130	231 nt		3.66	□□□□□ -1.82
TY4B-P	A0A0B7P3V8	DLS1	YJL065C	504 nt		3.66	□□□□□ -1.82
TY4B-P	A0A0B7P3V8	SRL3	YKR091W	741 nt		3.66	□□□□□ -1.82
TY4B-P	A0A0B7P3V8	YLR053C	YLR053C	327 nt		3.66	□□□□□ -1.82
TY4B-P	A0A0B7P3V8	YLR154W-B	YLR154W-B	165 nt		3.66	□□□□□ -1.82
TY4B-P	A0A0B7P3V8	YBL109W	YBL109W	336 nt		3.66	□□□□□ -1.82
TY4B-P	A0A0B7P3V8	PDC2	YDR081C	2778 nt		3.66	□□□□□ -1.82
TY4B-P	A0A0B7P3V8	YKL162C-A	YKL162C-A	153 nt		3.65	□□□□□ -1.83
TY4B-P	A0A0B7P3V8	ROD1	YOR018W	2514 nt		3.65	□□□□□ -1.83
TY4B-P	A0A0B7P3V8	MNT3	YIL014W	1893 nt		3.64	□□□□□ -1.83
TY4B-P	A0A0B7P3V8	MSR1	YHR091C	1932 nt		3.64	□□□□□ -1.83
TY4B-P	A0A0B7P3V8	XRN1	YGL173C	4587 nt		3.64	□□□□□ -1.83
TY4B-P	A0A0B7P3V8	CDC45	YLR103C	1953 nt		3.64	□□□□□ -1.83
TY4B-P	A0A0B7P3V8	snR60	snR60	104 nt		3.64	□□□□□ -1.83
TY4B-P	A0A0B7P3V8	tF(GAA)Q	tF(GAA)Q	75 nt		3.64	□□□□□ -1.83
TY4B-P	A0A0B7P3V8	RPS18B	YML026C	441 nt		3.64	□□□□□ -1.83
TY4B-P	A0A0B7P3V8	RLF2	YPR018W	1821 nt		3.64	□□□□□ -1.83
TY4B-P	A0A0B7P3V8	UBP5	YER144C	2418 nt		3.64	□□□□□ -1.83
TY4B-P	A0A0B7P3V8	TAF2	YCR042C	4224 nt		3.63	□□□□□ -1.83
TY4B-P	A0A0B7P3V8	YPR022C	YPR022C	3402 nt		3.63	□□□□□ -1.83
TY4B-P	A0A0B7P3V8	MRP10	YDL045W-A	288 nt		3.63	□□□□□ -1.83
TY4B-P	A0A0B7P3V8	YDL176W	YDL176W	2127 nt		3.63	□□□□□ -1.83
TY4B-P	A0A0B7P3V8	NCE101	YJL205C	162 nt		3.63	□□□□□ -1.83
TY4B-P	A0A0B7P3V8	ANB1	YJR047C	474 nt		3.63	□□□□□ -1.83
TY4B-P	A0A0B7P3V8	CCW14	YLR390W-A	717 nt		3.63	□□□□□ -1.83
TY4B-P	A0A0B7P3V8	SPA2	YLL021W	4401 nt		3.63	□□□□□ -1.83
TY4B-P	A0A0B7P3V8	TRZ1	YKR079C	2517 nt		3.63	□□□□□ -1.83
TY4B-P	A0A0B7P3V8	ARK1	YNL020C	1917 nt		3.62	□□□□□ -1.83
TY4B-P	A0A0B7P3V8	TIM13	YGR181W	318 nt		3.62	□□□□□ -1.83
TY4B-P	A0A0B7P3V8	YBL065W	YBL065W	345 nt		3.62	□□□□□ -1.83
TY4B-P	A0A0B7P3V8	HFM1	YGL251C	3564 nt		3.62	□□□□□ -1.83
TY4B-P	A0A0B7P3V8	MUS81	YDR386W	1899 nt		3.62	□□□□□ -1.83
TY4B-P	A0A0B7P3V8	SPT10	YJL127C	1923 nt		3.62	□□□□□ -1.83
TY4B-P	A0A0B7P3V8	VAS1	YGR094W	3315 nt		3.61	□□□□□ -1.83
TY4B-P	A0A0B7P3V8	MTC3	YGL226W	372 nt		3.61	□□□□□ -1.83
TY4B-P	A0A0B7P3V8	RSM19	YNR037C	276 nt		3.61	□□□□□ -1.83
TY4B-P	A0A0B7P3V8	NOG1	YPL093W	1944 nt		3.61	□□□□□ -1.83
TY4B-P	A0A0B7P3V8	RPN1	YHR027C	2982 nt		3.61	□□□□□ -1.83
TY4B-P	A0A0B7P3V8	SPO71	YDR104C	3738 nt		3.6	□□□□□ -1.83
TY4B-P	A0A0B7P3V8	YPK1	YKL126W	2043 nt		3.6	□□□□□ -1.83
TY4B-P	A0A0B7P3V8	YDL041W	YDL041W	354 nt		3.6	□□□□□ -1.83
TY4B-P	A0A0B7P3V8	VTC1	YER072W	390 nt		3.6	□□□□□ -1.83
TY4B-P	A0A0B7P3V8	AIM11	YER093C-A	414 nt		3.6	□□□□□ -1.83
TY4B-P	A0A0B7P3V8	HHT1	YBR010W	411 nt		3.6	□□□□□ -1.83
TY4B-P	A0A0B7P3V8	NUP82	YJL061W	2142 nt		3.59	□□□□□ -1.83
TY4B-P	A0A0B7P3V8	GIS4	YML006C	2325 nt		3.59	□□□□□ -1.83
TY4B-P	A0A0B7P3V8	YLR154W-E	YLR154W-E	204 nt		3.59	□□□□□ -1.83
TY4B-P	A0A0B7P3V8	RPL36A	YMR194W	303 nt		3.59	□□□□□ -1.83
TY4B-P	A0A0B7P3V8	YPR063C	YPR063C	423 nt		3.59	□□□□□ -1.83
TY4B-P	A0A0B7P3V8	PHO2	YDL106C	1680 nt		3.59	□□□□□ -1.84
TY4B-P	A0A0B7P3V8	GYP7	YDL234C	2241 nt		3.58	□□□□□ -1.84
TY4B-P	A0A0B7P3V8	snR79	snR79	84 nt		3.58	□□□□□ -1.84
TY4B-P	A0A0B7P3V8	YHL041W	YHL041W	450 nt		3.58	□□□□□ -1.84
TY4B-P	A0A0B7P3V8	YMR321C	YMR321C	318 nt		3.58	□□□□□ -1.84
TY4B-P	A0A0B7P3V8	KHA1	YJL094C	2622 nt		3.58	□□□□□ -1.84
TY4B-P	A0A0B7P3V8	NMA111	YNL123W	2994 nt		3.57	□□□□□ -1.84
TY4B-P	A0A0B7P3V8	TAO3	YIL129C	7131 nt		3.57	□□□□□ -1.84
TY4B-P	A0A0B7P3V8	CDC24	YAL041W	2565 nt		3.56	□□□□□ -1.84
TY4B-P	A0A0B7P3V8	YGL074C	YGL074C	327 nt		3.56	□□□□□ -1.84
TY4B-P	A0A0B7P3V8	YGL239C	YGL239C	315 nt		3.56	□□□□□ -1.84
TY4B-P	A0A0B7P3V8	YIL058W	YIL058W	285 nt		3.56	□□□□□ -1.84
TY4B-P	A0A0B7P3V8	SAR1	YPL218W	573 nt		3.56	□□□□□ -1.84
TY4B-P	A0A0B7P3V8	LRE1	YCL051W	1752 nt		3.56	□□□□□ -1.84
TY4B-P	A0A0B7P3V8	DUF1	YOL087C	3351 nt		3.55	□□□□□ -1.84
TY4B-P	A0A0B7P3V8	DAN4	YJR151C	3486 nt		3.55	□□□□□ -1.84
TY4B-P	A0A0B7P3V8	URA2	YJL130C	6645 nt		3.55	□□□□□ -1.84
TY4B-P	A0A0B7P3V8	FMP32	YFL046W	624 nt		3.55	□□□□□ -1.84
TY4B-P	A0A0B7P3V8	IGO2	YHR132W-A	396 nt		3.55	□□□□□ -1.84
TY4B-P	A0A0B7P3V8	tV(CAC)D	tV(CAC)D	73 nt		3.55	□□□□□ -1.84
TY4B-P	A0A0B7P3V8	tV(CAC)H	tV(CAC)H	73 nt		3.55	□□□□□ -1.84
TY4B-P	A0A0B7P3V8	RPL34B	YIL052C	366 nt		3.55	□□□□□ -1.84
TY4B-P	A0A0B7P3V8	PCC1	YKR095W-A	267 nt		3.55	□□□□□ -1.84
TY4B-P	A0A0B7P3V8	YNL028W	YNL028W	318 nt		3.55	□□□□□ -1.84
TY4B-P	A0A0B7P3V8	COP1	YDL145C	3606 nt		3.55	□□□□□ -1.84
TY4B-P	A0A0B7P3V8	RPA135	YPR010C	3612 nt		3.55	□□□□□ -1.84
TY4B-P	A0A0B7P3V8	VPS64	YDR200C	1815 nt		3.54	□□□□□ -1.84
TY4B-P	A0A0B7P3V8	YNL034W	YNL034W	1839 nt		3.54	□□□□□ -1.84
TY4B-P	A0A0B7P3V8	RRM3	YHR031C	2172 nt		3.54	□□□□□ -1.84
TY4B-P	A0A0B7P3V8	IES6	YEL044W	501 nt		3.54	□□□□□ -1.84
TY4B-P	A0A0B7P3V8	YLR120W-A	YLR120W-A	102 nt		3.54	□□□□□ -1.84

Retrieved 100 of 7,029 protein–RNA pairs in 37.3 ms