Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRAV12-1A0A0B4J245 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRAV12-1A0A0B4J245 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRAV12-1A0A0B4J245 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
TRAV12-1A0A0B4J245 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC14.33□□□□□ -0.11
TRAV12-1A0A0B4J245 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRAV12-1A0A0B4J245 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRAV12-1A0A0B4J245 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.11
TRAV12-1A0A0B4J245 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV12-1A0A0B4J245 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
TRAV12-1A0A0B4J245 AC011484.1-201ENST00000377652 1995 ntBASIC14.33□□□□□ -0.12
TRAV12-1A0A0B4J245 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV12-1A0A0B4J245 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC14.33□□□□□ -0.12
TRAV12-1A0A0B4J245 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
TRAV12-1A0A0B4J245 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV12-1A0A0B4J245 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV12-1A0A0B4J245 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV12-1A0A0B4J245 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV12-1A0A0B4J245 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV12-1A0A0B4J245 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC14.33□□□□□ -0.12
TRAV12-1A0A0B4J245 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
TRAV12-1A0A0B4J245 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
TRAV12-1A0A0B4J245 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV12-1A0A0B4J245 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC14.33□□□□□ -0.12
TRAV12-1A0A0B4J245 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV12-1A0A0B4J245 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV12-1A0A0B4J245 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV12-1A0A0B4J245 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV12-1A0A0B4J245 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV12-1A0A0B4J245 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV12-1A0A0B4J245 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV12-1A0A0B4J245 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV12-1A0A0B4J245 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TRAV12-1A0A0B4J245 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV12-1A0A0B4J245 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
TRAV12-1A0A0B4J245 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV12-1A0A0B4J245 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV12-1A0A0B4J245 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TRAV12-1A0A0B4J245 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV12-1A0A0B4J245 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV12-1A0A0B4J245 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV12-1A0A0B4J245 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAV12-1A0A0B4J245 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV12-1A0A0B4J245 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV12-1A0A0B4J245 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV12-1A0A0B4J245 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TRAV12-1A0A0B4J245 GTSE1-AS1-202ENST00000623117 1518 ntBASIC14.32□□□□□ -0.12
TRAV12-1A0A0B4J245 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV12-1A0A0B4J245 KRT18P60-201ENST00000312876 1297 ntBASIC14.32□□□□□ -0.12
TRAV12-1A0A0B4J245 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV12-1A0A0B4J245 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV12-1A0A0B4J245 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV12-1A0A0B4J245 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV12-1A0A0B4J245 TMEM179-206ENST00000616017 1645 ntBASIC14.32□□□□□ -0.12
TRAV12-1A0A0B4J245 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV12-1A0A0B4J245 NEFHP1-201ENST00000412845 2629 ntBASIC14.32□□□□□ -0.12
TRAV12-1A0A0B4J245 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAV12-1A0A0B4J245 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV12-1A0A0B4J245 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV12-1A0A0B4J245 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
TRAV12-1A0A0B4J245 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAV12-1A0A0B4J245 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV12-1A0A0B4J245 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV12-1A0A0B4J245 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC14.31□□□□□ -0.12
TRAV12-1A0A0B4J245 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
TRAV12-1A0A0B4J245 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC14.31□□□□□ -0.12
TRAV12-1A0A0B4J245 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC14.31□□□□□ -0.12
TRAV12-1A0A0B4J245 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAV12-1A0A0B4J245 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV12-1A0A0B4J245 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAV12-1A0A0B4J245 PVT1_1.1-201ENST00000615125 194 ntBASIC14.31□□□□□ -0.12
TRAV12-1A0A0B4J245 AC241377.3-202ENST00000626088 1088 ntBASIC14.31□□□□□ -0.12
TRAV12-1A0A0B4J245 AC241585.3-202ENST00000628937 1088 ntBASIC14.31□□□□□ -0.12
TRAV12-1A0A0B4J245 AC245100.8-202ENST00000629247 1058 ntBASIC14.31□□□□□ -0.12
TRAV12-1A0A0B4J245 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV12-1A0A0B4J245 AC093484.2-201ENST00000580996 2166 ntBASIC14.31□□□□□ -0.12
TRAV12-1A0A0B4J245 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV12-1A0A0B4J245 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV12-1A0A0B4J245 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
TRAV12-1A0A0B4J245 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV12-1A0A0B4J245 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV12-1A0A0B4J245 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV12-1A0A0B4J245 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV12-1A0A0B4J245 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV12-1A0A0B4J245 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC14.3□□□□□ -0.12
TRAV12-1A0A0B4J245 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC14.3□□□□□ -0.12
TRAV12-1A0A0B4J245 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAV12-1A0A0B4J245 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAV12-1A0A0B4J245 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
TRAV12-1A0A0B4J245 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV12-1A0A0B4J245 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV12-1A0A0B4J245 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
TRAV12-1A0A0B4J245 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV12-1A0A0B4J245 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV12-1A0A0B4J245 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV12-1A0A0B4J245 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV12-1A0A0B4J245 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV12-1A0A0B4J245 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAV12-1A0A0B4J245 Z82202.1-201ENST00000623446 1880 ntBASIC14.3□□□□□ -0.12
TRAV12-1A0A0B4J245 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms