Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV10A0A0B4J240 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV10A0A0B4J240 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV10A0A0B4J240 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV10A0A0B4J240 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV10A0A0B4J240 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV10A0A0B4J240 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV10A0A0B4J240 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV10A0A0B4J240 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC14.42□□□□□ -0.1
TRAV10A0A0B4J240 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV10A0A0B4J240 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
TRAV10A0A0B4J240 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV10A0A0B4J240 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
TRAV10A0A0B4J240 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV10A0A0B4J240 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV10A0A0B4J240 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC14.41□□□□□ -0.1
TRAV10A0A0B4J240 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV10A0A0B4J240 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV10A0A0B4J240 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV10A0A0B4J240 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV10A0A0B4J240 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV10A0A0B4J240 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC14.41□□□□□ -0.1
TRAV10A0A0B4J240 KRT17P3-201ENST00000420566 1262 ntBASIC14.41□□□□□ -0.1
TRAV10A0A0B4J240 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC14.41□□□□□ -0.1
TRAV10A0A0B4J240 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
TRAV10A0A0B4J240 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
TRAV10A0A0B4J240 C2orf69P4-201ENST00000565394 541 ntBASIC14.41□□□□□ -0.1
TRAV10A0A0B4J240 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC14.41□□□□□ -0.1
TRAV10A0A0B4J240 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC14.41□□□□□ -0.1
TRAV10A0A0B4J240 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC14.41□□□□□ -0.1
TRAV10A0A0B4J240 BRWD1-AS2-201ENST00000603064 1028 ntBASIC14.41□□□□□ -0.1
TRAV10A0A0B4J240 EXOC3-AS1-202ENST00000623673 1663 ntBASIC14.41□□□□□ -0.1
TRAV10A0A0B4J240 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV10A0A0B4J240 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV10A0A0B4J240 AC244015.2-201ENST00000616358 1861 ntBASIC14.41□□□□□ -0.1
TRAV10A0A0B4J240 LSR-203ENST00000360798 1963 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV10A0A0B4J240 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV10A0A0B4J240 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV10A0A0B4J240 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV10A0A0B4J240 SLC25A24-204ENST00000569674 2357 ntBASIC14.41□□□□□ -0.1
TRAV10A0A0B4J240 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV10A0A0B4J240 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV10A0A0B4J240 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV10A0A0B4J240 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV10A0A0B4J240 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC14.41□□□□□ -0.1
TRAV10A0A0B4J240 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV10A0A0B4J240 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV10A0A0B4J240 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV10A0A0B4J240 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV10A0A0B4J240 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV10A0A0B4J240 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV10A0A0B4J240 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV10A0A0B4J240 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV10A0A0B4J240 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV10A0A0B4J240 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV10A0A0B4J240 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV10A0A0B4J240 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV10A0A0B4J240 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC14.4□□□□□ -0.1
TRAV10A0A0B4J240 AC142381.4-202ENST00000563973 229 ntBASIC14.4□□□□□ -0.1
TRAV10A0A0B4J240 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC14.4□□□□□ -0.1
TRAV10A0A0B4J240 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC14.4□□□□□ -0.1
TRAV10A0A0B4J240 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC14.4□□□□□ -0.1
TRAV10A0A0B4J240 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC14.4□□□□□ -0.1
TRAV10A0A0B4J240 MMD2-204ENST00000612910 778 ntTSL 5 BASIC14.4□□□□□ -0.1
TRAV10A0A0B4J240 AL117328.2-201ENST00000624617 1940 ntBASIC14.4□□□□□ -0.1
TRAV10A0A0B4J240 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV10A0A0B4J240 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV10A0A0B4J240 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
TRAV10A0A0B4J240 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV10A0A0B4J240 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC14.4□□□□□ -0.1
TRAV10A0A0B4J240 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAV10A0A0B4J240 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC14.4□□□□□ -0.1
TRAV10A0A0B4J240 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
TRAV10A0A0B4J240 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV10A0A0B4J240 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
TRAV10A0A0B4J240 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
TRAV10A0A0B4J240 BAALC-201ENST00000297574 801 ntTSL 3 BASIC14.39□□□□□ -0.11
TRAV10A0A0B4J240 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV10A0A0B4J240 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV10A0A0B4J240 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC14.39□□□□□ -0.11
TRAV10A0A0B4J240 AL158047.1-201ENST00000445918 881 ntBASIC14.39□□□□□ -0.11
TRAV10A0A0B4J240 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC14.39□□□□□ -0.11
TRAV10A0A0B4J240 UNC93B4-201ENST00000505679 747 ntBASIC14.39□□□□□ -0.11
TRAV10A0A0B4J240 AC093827.2-201ENST00000512654 315 ntBASIC14.39□□□□□ -0.11
TRAV10A0A0B4J240 DET1-205ENST00000558413 583 ntTSL 4 BASIC14.39□□□□□ -0.11
TRAV10A0A0B4J240 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC14.39□□□□□ -0.11
TRAV10A0A0B4J240 AL356652.1-201ENST00000615962 565 ntBASIC14.39□□□□□ -0.11
TRAV10A0A0B4J240 AC073648.6-201ENST00000641589 218 ntBASIC14.39□□□□□ -0.11
TRAV10A0A0B4J240 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV10A0A0B4J240 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC14.39□□□□□ -0.11
TRAV10A0A0B4J240 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV10A0A0B4J240 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV10A0A0B4J240 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC14.39□□□□□ -0.11
TRAV10A0A0B4J240 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
TRAV10A0A0B4J240 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV10A0A0B4J240 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV10A0A0B4J240 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV10A0A0B4J240 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
TRAV10A0A0B4J240 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV10A0A0B4J240 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms