Protein–RNA interactions for Protein: A0A0B4J1X8

IGHV3-43, Immunoglobulin heavy variable 3-43, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43A0A0B4J1X8 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
IGHV3-43A0A0B4J1X8 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC16.94■□□□□ 0.3
IGHV3-43A0A0B4J1X8 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC16.94■□□□□ 0.3
IGHV3-43A0A0B4J1X8 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
IGHV3-43A0A0B4J1X8 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
IGHV3-43A0A0B4J1X8 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC16.94■□□□□ 0.3
IGHV3-43A0A0B4J1X8 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
IGHV3-43A0A0B4J1X8 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC16.94■□□□□ 0.3
IGHV3-43A0A0B4J1X8 AL121603.2-201ENST00000557373 2117 ntBASIC16.94■□□□□ 0.3
IGHV3-43A0A0B4J1X8 AC116050.2-201ENST00000612102 1779 ntBASIC16.94■□□□□ 0.3
IGHV3-43A0A0B4J1X8 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
IGHV3-43A0A0B4J1X8 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC16.94■□□□□ 0.3
IGHV3-43A0A0B4J1X8 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
IGHV3-43A0A0B4J1X8 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC16.93■□□□□ 0.3
IGHV3-43A0A0B4J1X8 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC16.93■□□□□ 0.3
IGHV3-43A0A0B4J1X8 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC16.93■□□□□ 0.3
IGHV3-43A0A0B4J1X8 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
IGHV3-43A0A0B4J1X8 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
IGHV3-43A0A0B4J1X8 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC16.93■□□□□ 0.3
IGHV3-43A0A0B4J1X8 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
IGHV3-43A0A0B4J1X8 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
IGHV3-43A0A0B4J1X8 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
IGHV3-43A0A0B4J1X8 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
IGHV3-43A0A0B4J1X8 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
IGHV3-43A0A0B4J1X8 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
IGHV3-43A0A0B4J1X8 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
IGHV3-43A0A0B4J1X8 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
IGHV3-43A0A0B4J1X8 AC097381.1-201ENST00000429019 1296 ntBASIC16.93■□□□□ 0.3
IGHV3-43A0A0B4J1X8 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC16.93■□□□□ 0.3
IGHV3-43A0A0B4J1X8 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
IGHV3-43A0A0B4J1X8 AC020907.5-201ENST00000624372 1936 ntBASIC16.93■□□□□ 0.3
IGHV3-43A0A0B4J1X8 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
IGHV3-43A0A0B4J1X8 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
IGHV3-43A0A0B4J1X8 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC16.93■□□□□ 0.3
IGHV3-43A0A0B4J1X8 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC16.93■□□□□ 0.3
IGHV3-43A0A0B4J1X8 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
IGHV3-43A0A0B4J1X8 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
IGHV3-43A0A0B4J1X8 AC019069.1-201ENST00000610008 1333 ntBASIC16.93■□□□□ 0.3
IGHV3-43A0A0B4J1X8 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
IGHV3-43A0A0B4J1X8 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
IGHV3-43A0A0B4J1X8 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC16.92■□□□□ 0.3
IGHV3-43A0A0B4J1X8 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC16.92■□□□□ 0.3
IGHV3-43A0A0B4J1X8 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
IGHV3-43A0A0B4J1X8 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
IGHV3-43A0A0B4J1X8 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
IGHV3-43A0A0B4J1X8 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
IGHV3-43A0A0B4J1X8 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
IGHV3-43A0A0B4J1X8 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC16.92■□□□□ 0.3
IGHV3-43A0A0B4J1X8 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
IGHV3-43A0A0B4J1X8 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
IGHV3-43A0A0B4J1X8 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
IGHV3-43A0A0B4J1X8 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC16.92■□□□□ 0.3
IGHV3-43A0A0B4J1X8 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC16.92■□□□□ 0.3
IGHV3-43A0A0B4J1X8 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC16.92■□□□□ 0.3
IGHV3-43A0A0B4J1X8 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC16.92■□□□□ 0.3
IGHV3-43A0A0B4J1X8 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC16.92■□□□□ 0.3
IGHV3-43A0A0B4J1X8 MIR6821-201ENST00000617625 74 ntBASIC16.92■□□□□ 0.3
IGHV3-43A0A0B4J1X8 RBM17P2-201ENST00000616397 1405 ntBASIC16.92■□□□□ 0.3
IGHV3-43A0A0B4J1X8 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
IGHV3-43A0A0B4J1X8 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC16.92■□□□□ 0.3
IGHV3-43A0A0B4J1X8 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
IGHV3-43A0A0B4J1X8 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
IGHV3-43A0A0B4J1X8 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
IGHV3-43A0A0B4J1X8 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
IGHV3-43A0A0B4J1X8 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
IGHV3-43A0A0B4J1X8 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
IGHV3-43A0A0B4J1X8 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.91■□□□□ 0.3
IGHV3-43A0A0B4J1X8 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
IGHV3-43A0A0B4J1X8 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
IGHV3-43A0A0B4J1X8 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC16.91■□□□□ 0.3
IGHV3-43A0A0B4J1X8 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
IGHV3-43A0A0B4J1X8 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
IGHV3-43A0A0B4J1X8 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
IGHV3-43A0A0B4J1X8 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
IGHV3-43A0A0B4J1X8 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC16.91■□□□□ 0.3
IGHV3-43A0A0B4J1X8 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
IGHV3-43A0A0B4J1X8 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
IGHV3-43A0A0B4J1X8 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
IGHV3-43A0A0B4J1X8 PARP1-202ENST00000366792 553 ntTSL 3 BASIC16.91■□□□□ 0.3
IGHV3-43A0A0B4J1X8 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC16.91■□□□□ 0.3
IGHV3-43A0A0B4J1X8 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC16.91■□□□□ 0.3
IGHV3-43A0A0B4J1X8 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC16.91■□□□□ 0.3
IGHV3-43A0A0B4J1X8 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC16.91■□□□□ 0.3
IGHV3-43A0A0B4J1X8 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC16.91■□□□□ 0.3
IGHV3-43A0A0B4J1X8 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC16.91■□□□□ 0.3
IGHV3-43A0A0B4J1X8 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
IGHV3-43A0A0B4J1X8 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC16.91■□□□□ 0.3
IGHV3-43A0A0B4J1X8 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
IGHV3-43A0A0B4J1X8 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
IGHV3-43A0A0B4J1X8 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC16.91■□□□□ 0.3
IGHV3-43A0A0B4J1X8 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
IGHV3-43A0A0B4J1X8 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
IGHV3-43A0A0B4J1X8 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC16.9■□□□□ 0.3
IGHV3-43A0A0B4J1X8 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
IGHV3-43A0A0B4J1X8 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC16.9■□□□□ 0.3
IGHV3-43A0A0B4J1X8 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
IGHV3-43A0A0B4J1X8 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
IGHV3-43A0A0B4J1X8 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC16.9■□□□□ 0.3
IGHV3-43A0A0B4J1X8 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
IGHV3-43A0A0B4J1X8 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms