Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.16■□□□□ 0.66
TRBV5-3A0A0A0MS03 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRBV5-3A0A0A0MS03 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRBV5-3A0A0A0MS03 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRBV5-3A0A0A0MS03 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRBV5-3A0A0A0MS03 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
TRBV5-3A0A0A0MS03 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.16■□□□□ 0.66
TRBV5-3A0A0A0MS03 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRBV5-3A0A0A0MS03 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.16■□□□□ 0.66
TRBV5-3A0A0A0MS03 AC091799.1-201ENST00000422823 811 ntBASIC19.16■□□□□ 0.66
TRBV5-3A0A0A0MS03 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.16■□□□□ 0.66
TRBV5-3A0A0A0MS03 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.16■□□□□ 0.66
TRBV5-3A0A0A0MS03 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.16■□□□□ 0.66
TRBV5-3A0A0A0MS03 AP001160.3-201ENST00000601484 763 ntBASIC19.16■□□□□ 0.66
TRBV5-3A0A0A0MS03 AL139246.5-201ENST00000606645 996 ntBASIC19.16■□□□□ 0.66
TRBV5-3A0A0A0MS03 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.16■□□□□ 0.66
TRBV5-3A0A0A0MS03 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRBV5-3A0A0A0MS03 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRBV5-3A0A0A0MS03 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRBV5-3A0A0A0MS03 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRBV5-3A0A0A0MS03 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRBV5-3A0A0A0MS03 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRBV5-3A0A0A0MS03 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRBV5-3A0A0A0MS03 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TRBV5-3A0A0A0MS03 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
TRBV5-3A0A0A0MS03 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.16■□□□□ 0.66
TRBV5-3A0A0A0MS03 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRBV5-3A0A0A0MS03 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.15■□□□□ 0.66
TRBV5-3A0A0A0MS03 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRBV5-3A0A0A0MS03 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRBV5-3A0A0A0MS03 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.15■□□□□ 0.66
TRBV5-3A0A0A0MS03 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRBV5-3A0A0A0MS03 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.15■□□□□ 0.66
TRBV5-3A0A0A0MS03 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRBV5-3A0A0A0MS03 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRBV5-3A0A0A0MS03 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRBV5-3A0A0A0MS03 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRBV5-3A0A0A0MS03 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRBV5-3A0A0A0MS03 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.15■□□□□ 0.66
TRBV5-3A0A0A0MS03 AC243732.1-201ENST00000612648 864 ntBASIC19.15■□□□□ 0.66
TRBV5-3A0A0A0MS03 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRBV5-3A0A0A0MS03 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TRBV5-3A0A0A0MS03 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.15■□□□□ 0.66
TRBV5-3A0A0A0MS03 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
TRBV5-3A0A0A0MS03 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.14■□□□□ 0.65
TRBV5-3A0A0A0MS03 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRBV5-3A0A0A0MS03 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRBV5-3A0A0A0MS03 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
TRBV5-3A0A0A0MS03 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
TRBV5-3A0A0A0MS03 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
TRBV5-3A0A0A0MS03 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRBV5-3A0A0A0MS03 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRBV5-3A0A0A0MS03 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRBV5-3A0A0A0MS03 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRBV5-3A0A0A0MS03 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
TRBV5-3A0A0A0MS03 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRBV5-3A0A0A0MS03 CCDC92B-201ENST00000575506 885 ntBASIC19.14■□□□□ 0.65
TRBV5-3A0A0A0MS03 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.14■□□□□ 0.65
TRBV5-3A0A0A0MS03 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRBV5-3A0A0A0MS03 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRBV5-3A0A0A0MS03 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.14■□□□□ 0.65
TRBV5-3A0A0A0MS03 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
TRBV5-3A0A0A0MS03 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.14■□□□□ 0.65
TRBV5-3A0A0A0MS03 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRBV5-3A0A0A0MS03 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRBV5-3A0A0A0MS03 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
TRBV5-3A0A0A0MS03 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRBV5-3A0A0A0MS03 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRBV5-3A0A0A0MS03 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.13■□□□□ 0.65
TRBV5-3A0A0A0MS03 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRBV5-3A0A0A0MS03 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.13■□□□□ 0.65
TRBV5-3A0A0A0MS03 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRBV5-3A0A0A0MS03 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRBV5-3A0A0A0MS03 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.13■□□□□ 0.65
TRBV5-3A0A0A0MS03 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRBV5-3A0A0A0MS03 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.13■□□□□ 0.65
TRBV5-3A0A0A0MS03 KRT18P20-201ENST00000548986 1279 ntBASIC19.13■□□□□ 0.65
TRBV5-3A0A0A0MS03 AC142381.2-201ENST00000566120 298 ntBASIC19.13■□□□□ 0.65
TRBV5-3A0A0A0MS03 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
TRBV5-3A0A0A0MS03 LINC02228-203ENST00000641970 1355 ntBASIC19.13■□□□□ 0.65
TRBV5-3A0A0A0MS03 RBM17P2-201ENST00000616397 1405 ntBASIC19.13■□□□□ 0.65
TRBV5-3A0A0A0MS03 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
TRBV5-3A0A0A0MS03 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
TRBV5-3A0A0A0MS03 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.12■□□□□ 0.65
TRBV5-3A0A0A0MS03 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.12■□□□□ 0.65
TRBV5-3A0A0A0MS03 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.12■□□□□ 0.65
TRBV5-3A0A0A0MS03 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
TRBV5-3A0A0A0MS03 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
TRBV5-3A0A0A0MS03 AL158211.5-201ENST00000623583 2518 ntBASIC19.12■□□□□ 0.65
TRBV5-3A0A0A0MS03 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
TRBV5-3A0A0A0MS03 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV5-3A0A0A0MS03 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
TRBV5-3A0A0A0MS03 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.12■□□□□ 0.65
TRBV5-3A0A0A0MS03 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV5-3A0A0A0MS03 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV5-3A0A0A0MS03 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV5-3A0A0A0MS03 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV5-3A0A0A0MS03 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV5-3A0A0A0MS03 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV5-3A0A0A0MS03 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms