Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV18A0A075B6X5 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.52■□□□□ 0.4
TRAV18A0A075B6X5 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV18A0A075B6X5 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV18A0A075B6X5 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.52■□□□□ 0.4
TRAV18A0A075B6X5 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV18A0A075B6X5 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.52■□□□□ 0.4
TRAV18A0A075B6X5 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV18A0A075B6X5 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.52■□□□□ 0.4
TRAV18A0A075B6X5 SNX3-202ENST00000349379 890 ntTSL 2 BASIC17.52■□□□□ 0.4
TRAV18A0A075B6X5 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC17.52■□□□□ 0.4
TRAV18A0A075B6X5 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.52■□□□□ 0.4
TRAV18A0A075B6X5 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC17.52■□□□□ 0.4
TRAV18A0A075B6X5 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC17.52■□□□□ 0.4
TRAV18A0A075B6X5 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRAV18A0A075B6X5 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.52■□□□□ 0.39
TRAV18A0A075B6X5 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRAV18A0A075B6X5 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
TRAV18A0A075B6X5 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRAV18A0A075B6X5 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
TRAV18A0A075B6X5 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.52■□□□□ 0.39
TRAV18A0A075B6X5 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRAV18A0A075B6X5 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV18A0A075B6X5 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.51■□□□□ 0.39
TRAV18A0A075B6X5 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.51■□□□□ 0.39
TRAV18A0A075B6X5 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV18A0A075B6X5 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.51■□□□□ 0.39
TRAV18A0A075B6X5 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
TRAV18A0A075B6X5 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.51■□□□□ 0.39
TRAV18A0A075B6X5 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV18A0A075B6X5 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV18A0A075B6X5 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.51■□□□□ 0.39
TRAV18A0A075B6X5 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC17.51■□□□□ 0.39
TRAV18A0A075B6X5 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV18A0A075B6X5 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
TRAV18A0A075B6X5 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.51■□□□□ 0.39
TRAV18A0A075B6X5 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
TRAV18A0A075B6X5 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC17.51■□□□□ 0.39
TRAV18A0A075B6X5 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV18A0A075B6X5 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.51■□□□□ 0.39
TRAV18A0A075B6X5 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV18A0A075B6X5 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV18A0A075B6X5 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV18A0A075B6X5 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
TRAV18A0A075B6X5 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV18A0A075B6X5 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV18A0A075B6X5 BX323043.1-201ENST00000641006 1765 ntBASIC17.51■□□□□ 0.39
TRAV18A0A075B6X5 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV18A0A075B6X5 AC098818.2-201ENST00000564925 2320 ntBASIC17.5■□□□□ 0.39
TRAV18A0A075B6X5 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV18A0A075B6X5 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TRAV18A0A075B6X5 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV18A0A075B6X5 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.5■□□□□ 0.39
TRAV18A0A075B6X5 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV18A0A075B6X5 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV18A0A075B6X5 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.5■□□□□ 0.39
TRAV18A0A075B6X5 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV18A0A075B6X5 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV18A0A075B6X5 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV18A0A075B6X5 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.5■□□□□ 0.39
TRAV18A0A075B6X5 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
TRAV18A0A075B6X5 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.5■□□□□ 0.39
TRAV18A0A075B6X5 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV18A0A075B6X5 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV18A0A075B6X5 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV18A0A075B6X5 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV18A0A075B6X5 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV18A0A075B6X5 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV18A0A075B6X5 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.5■□□□□ 0.39
TRAV18A0A075B6X5 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV18A0A075B6X5 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
TRAV18A0A075B6X5 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TRAV18A0A075B6X5 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV18A0A075B6X5 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
TRAV18A0A075B6X5 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV18A0A075B6X5 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV18A0A075B6X5 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV18A0A075B6X5 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV18A0A075B6X5 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
TRAV18A0A075B6X5 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.49■□□□□ 0.39
TRAV18A0A075B6X5 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV18A0A075B6X5 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.49■□□□□ 0.39
TRAV18A0A075B6X5 AL158211.5-201ENST00000623583 2518 ntBASIC17.49■□□□□ 0.39
TRAV18A0A075B6X5 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV18A0A075B6X5 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV18A0A075B6X5 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
TRAV18A0A075B6X5 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV18A0A075B6X5 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV18A0A075B6X5 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TRAV18A0A075B6X5 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV18A0A075B6X5 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
TRAV18A0A075B6X5 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC17.49■□□□□ 0.39
TRAV18A0A075B6X5 GRAMD4P7-201ENST00000578182 1232 ntBASIC17.49■□□□□ 0.39
TRAV18A0A075B6X5 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV18A0A075B6X5 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV18A0A075B6X5 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV18A0A075B6X5 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV18A0A075B6X5 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV18A0A075B6X5 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV18A0A075B6X5 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms