Protein–RNA interactions for Protein: Q9HCH3

CPNE5, Copine-5, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE5Q9HCH3 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CPNE5Q9HCH3 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC25.29■■□□□ 1.64
CPNE5Q9HCH3 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CPNE5Q9HCH3 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CPNE5Q9HCH3 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CPNE5Q9HCH3 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC25.27■■□□□ 1.64
CPNE5Q9HCH3 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC25.27■■□□□ 1.64
CPNE5Q9HCH3 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
CPNE5Q9HCH3 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
CPNE5Q9HCH3 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC25.27■■□□□ 1.64
CPNE5Q9HCH3 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CPNE5Q9HCH3 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CPNE5Q9HCH3 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
CPNE5Q9HCH3 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC25.25■■□□□ 1.63
CPNE5Q9HCH3 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CPNE5Q9HCH3 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CPNE5Q9HCH3 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
CPNE5Q9HCH3 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
CPNE5Q9HCH3 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC25.24■■□□□ 1.63
CPNE5Q9HCH3 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
CPNE5Q9HCH3 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
CPNE5Q9HCH3 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
CPNE5Q9HCH3 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
CPNE5Q9HCH3 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC25.22■■□□□ 1.63
CPNE5Q9HCH3 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CPNE5Q9HCH3 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
CPNE5Q9HCH3 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC25.21■■□□□ 1.63
CPNE5Q9HCH3 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC25.2■■□□□ 1.62
CPNE5Q9HCH3 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC25.2■■□□□ 1.62
CPNE5Q9HCH3 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
CPNE5Q9HCH3 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.62
CPNE5Q9HCH3 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CPNE5Q9HCH3 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CPNE5Q9HCH3 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
CPNE5Q9HCH3 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC25.19■■□□□ 1.62
CPNE5Q9HCH3 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
CPNE5Q9HCH3 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
CPNE5Q9HCH3 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC25.18■■□□□ 1.62
CPNE5Q9HCH3 AC139426.1-201ENST00000568218 2529 ntBASIC25.18■■□□□ 1.62
CPNE5Q9HCH3 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
CPNE5Q9HCH3 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC25.16■■□□□ 1.62
CPNE5Q9HCH3 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CPNE5Q9HCH3 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CPNE5Q9HCH3 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
CPNE5Q9HCH3 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CPNE5Q9HCH3 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CPNE5Q9HCH3 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CPNE5Q9HCH3 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
CPNE5Q9HCH3 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC25.15■■□□□ 1.62
CPNE5Q9HCH3 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CPNE5Q9HCH3 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC25.14■■□□□ 1.62
CPNE5Q9HCH3 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CPNE5Q9HCH3 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CPNE5Q9HCH3 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CPNE5Q9HCH3 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CPNE5Q9HCH3 METRNL-202ENST00000570778 967 ntTSL 5 BASIC25.13■■□□□ 1.61
CPNE5Q9HCH3 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CPNE5Q9HCH3 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC25.12■■□□□ 1.61
CPNE5Q9HCH3 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CPNE5Q9HCH3 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC25.12■■□□□ 1.61
CPNE5Q9HCH3 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
CPNE5Q9HCH3 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CPNE5Q9HCH3 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CPNE5Q9HCH3 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CPNE5Q9HCH3 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC25.1■■□□□ 1.61
CPNE5Q9HCH3 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CPNE5Q9HCH3 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.6
CPNE5Q9HCH3 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC25.07■■□□□ 1.6
CPNE5Q9HCH3 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC25.07■■□□□ 1.6
CPNE5Q9HCH3 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CPNE5Q9HCH3 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CPNE5Q9HCH3 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
CPNE5Q9HCH3 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
CPNE5Q9HCH3 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC25.05■■□□□ 1.6
CPNE5Q9HCH3 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CPNE5Q9HCH3 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CPNE5Q9HCH3 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CPNE5Q9HCH3 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CPNE5Q9HCH3 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CPNE5Q9HCH3 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CPNE5Q9HCH3 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC25.02■■□□□ 1.6
CPNE5Q9HCH3 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CPNE5Q9HCH3 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
CPNE5Q9HCH3 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC25.01■■□□□ 1.59
CPNE5Q9HCH3 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CPNE5Q9HCH3 RARRES2P2-201ENST00000394842 485 ntBASIC25■■□□□ 1.59
CPNE5Q9HCH3 DUX4L13-201ENST00000554103 1267 ntBASIC25■■□□□ 1.59
CPNE5Q9HCH3 DUX4L15-201ENST00000611059 1267 ntBASIC25■■□□□ 1.59
CPNE5Q9HCH3 DUX4L23-201ENST00000615195 1269 ntBASIC25■■□□□ 1.59
CPNE5Q9HCH3 DUX4L24-201ENST00000617576 1269 ntBASIC25■■□□□ 1.59
CPNE5Q9HCH3 DUX4L22-201ENST00000618238 1269 ntBASIC25■■□□□ 1.59
CPNE5Q9HCH3 DUX4L20-201ENST00000619712 1269 ntBASIC25■■□□□ 1.59
CPNE5Q9HCH3 DUX4L21-201ENST00000622058 1269 ntBASIC25■■□□□ 1.59
CPNE5Q9HCH3 DUX4L10-201ENST00000622460 1267 ntBASIC25■■□□□ 1.59
CPNE5Q9HCH3 DUX4L25-201ENST00000624915 1269 ntBASIC25■■□□□ 1.59
CPNE5Q9HCH3 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
CPNE5Q9HCH3 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
CPNE5Q9HCH3 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC24.98■■□□□ 1.59
CPNE5Q9HCH3 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CPNE5Q9HCH3 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC24.98■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms