Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC27.39■■□□□ 1.98
Ddx39aQ8VDW0 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Ddx39aQ8VDW0 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Ddx39aQ8VDW0 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Ddx39aQ8VDW0 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Ddx39aQ8VDW0 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
Ddx39aQ8VDW0 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Ddx39aQ8VDW0 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.96
Ddx39aQ8VDW0 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Ddx39aQ8VDW0 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Ddx39aQ8VDW0 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Ddx39aQ8VDW0 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Ddx39aQ8VDW0 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
Ddx39aQ8VDW0 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Ddx39aQ8VDW0 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Ddx39aQ8VDW0 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC27.29■■□□□ 1.96
Ddx39aQ8VDW0 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Ddx39aQ8VDW0 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Ddx39aQ8VDW0 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Ddx39aQ8VDW0 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Ddx39aQ8VDW0 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC27.25■■□□□ 1.95
Ddx39aQ8VDW0 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC27.25■■□□□ 1.95
Ddx39aQ8VDW0 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Ddx39aQ8VDW0 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Ddx39aQ8VDW0 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC27.22■■□□□ 1.95
Ddx39aQ8VDW0 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Ddx39aQ8VDW0 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC27.21■■□□□ 1.95
Ddx39aQ8VDW0 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC27.21■■□□□ 1.95
Ddx39aQ8VDW0 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Ddx39aQ8VDW0 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Ddx39aQ8VDW0 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC27.19■■□□□ 1.94
Ddx39aQ8VDW0 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC27.18■■□□□ 1.94
Ddx39aQ8VDW0 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC27.18■■□□□ 1.94
Ddx39aQ8VDW0 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Ddx39aQ8VDW0 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC27.17■■□□□ 1.94
Ddx39aQ8VDW0 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC27.16■■□□□ 1.94
Ddx39aQ8VDW0 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
Ddx39aQ8VDW0 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
Ddx39aQ8VDW0 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC27.15■■□□□ 1.94
Ddx39aQ8VDW0 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC27.15■■□□□ 1.94
Ddx39aQ8VDW0 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Ddx39aQ8VDW0 AC153504.1-201ENSMUST00000218379 2290 ntBASIC27.13■■□□□ 1.93
Ddx39aQ8VDW0 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC27.13■■□□□ 1.93
Ddx39aQ8VDW0 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Ddx39aQ8VDW0 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC27.13■■□□□ 1.93
Ddx39aQ8VDW0 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Ddx39aQ8VDW0 Gm7432-201ENSMUST00000210343 879 ntBASIC27.12■■□□□ 1.93
Ddx39aQ8VDW0 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
Ddx39aQ8VDW0 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Ddx39aQ8VDW0 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC27.11■■□□□ 1.93
Ddx39aQ8VDW0 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC27.11■■□□□ 1.93
Ddx39aQ8VDW0 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
Ddx39aQ8VDW0 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Ddx39aQ8VDW0 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Ddx39aQ8VDW0 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC27.09■■□□□ 1.93
Ddx39aQ8VDW0 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Ddx39aQ8VDW0 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Ddx39aQ8VDW0 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC27.08■■□□□ 1.93
Ddx39aQ8VDW0 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Ddx39aQ8VDW0 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC27.07■■□□□ 1.92
Ddx39aQ8VDW0 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC27.06■■□□□ 1.92
Ddx39aQ8VDW0 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC27.06■■□□□ 1.92
Ddx39aQ8VDW0 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Ddx39aQ8VDW0 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC27.04■■□□□ 1.92
Ddx39aQ8VDW0 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC27.04■■□□□ 1.92
Ddx39aQ8VDW0 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC27.03■■□□□ 1.92
Ddx39aQ8VDW0 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Ddx39aQ8VDW0 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Ddx39aQ8VDW0 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Ddx39aQ8VDW0 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Ddx39aQ8VDW0 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC27.02■■□□□ 1.92
Ddx39aQ8VDW0 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Ddx39aQ8VDW0 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC27.01■■□□□ 1.91
Ddx39aQ8VDW0 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
Ddx39aQ8VDW0 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Ddx39aQ8VDW0 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Ddx39aQ8VDW0 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Ddx39aQ8VDW0 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC26.99■■□□□ 1.91
Ddx39aQ8VDW0 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC26.98■■□□□ 1.91
Ddx39aQ8VDW0 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Ddx39aQ8VDW0 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC26.97■■□□□ 1.91
Ddx39aQ8VDW0 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC26.97■■□□□ 1.91
Ddx39aQ8VDW0 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC26.96■■□□□ 1.91
Ddx39aQ8VDW0 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Ddx39aQ8VDW0 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Ddx39aQ8VDW0 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26.95■■□□□ 1.91
Ddx39aQ8VDW0 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.9
Ddx39aQ8VDW0 Gm11599-201ENSMUST00000118720 878 ntBASIC26.95■■□□□ 1.9
Ddx39aQ8VDW0 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC26.95■■□□□ 1.9
Ddx39aQ8VDW0 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Ddx39aQ8VDW0 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC26.95■■□□□ 1.9
Ddx39aQ8VDW0 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Ddx39aQ8VDW0 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
Ddx39aQ8VDW0 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Ddx39aQ8VDW0 Gm30023-201ENSMUST00000197970 889 ntBASIC26.93■■□□□ 1.9
Ddx39aQ8VDW0 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC26.93■■□□□ 1.9
Ddx39aQ8VDW0 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Ddx39aQ8VDW0 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC26.92■■□□□ 1.9
Ddx39aQ8VDW0 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
Ddx39aQ8VDW0 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC26.91■■□□□ 1.9
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms