Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
TMEFF1Q8IYR6 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
TMEFF1Q8IYR6 METRNL-202ENST00000570778 967 ntTSL 5 BASIC26.47■■□□□ 1.83
TMEFF1Q8IYR6 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
TMEFF1Q8IYR6 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
TMEFF1Q8IYR6 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
TMEFF1Q8IYR6 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
TMEFF1Q8IYR6 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC26.45■■□□□ 1.82
TMEFF1Q8IYR6 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
TMEFF1Q8IYR6 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC26.44■■□□□ 1.82
TMEFF1Q8IYR6 DUX4L13-201ENST00000554103 1267 ntBASIC26.44■■□□□ 1.82
TMEFF1Q8IYR6 DUX4L15-201ENST00000611059 1267 ntBASIC26.44■■□□□ 1.82
TMEFF1Q8IYR6 DUX4L23-201ENST00000615195 1269 ntBASIC26.44■■□□□ 1.82
TMEFF1Q8IYR6 DUX4L24-201ENST00000617576 1269 ntBASIC26.44■■□□□ 1.82
TMEFF1Q8IYR6 DUX4L22-201ENST00000618238 1269 ntBASIC26.44■■□□□ 1.82
TMEFF1Q8IYR6 DUX4L20-201ENST00000619712 1269 ntBASIC26.44■■□□□ 1.82
TMEFF1Q8IYR6 DUX4L21-201ENST00000622058 1269 ntBASIC26.44■■□□□ 1.82
TMEFF1Q8IYR6 DUX4L10-201ENST00000622460 1267 ntBASIC26.44■■□□□ 1.82
TMEFF1Q8IYR6 DUX4L25-201ENST00000624915 1269 ntBASIC26.44■■□□□ 1.82
TMEFF1Q8IYR6 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC26.43■■□□□ 1.82
TMEFF1Q8IYR6 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
TMEFF1Q8IYR6 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
TMEFF1Q8IYR6 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC26.43■■□□□ 1.82
TMEFF1Q8IYR6 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC26.43■■□□□ 1.82
TMEFF1Q8IYR6 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
TMEFF1Q8IYR6 HES6-205ENST00000409356 528 ntTSL 2 BASIC26.4■■□□□ 1.82
TMEFF1Q8IYR6 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC26.4■■□□□ 1.82
TMEFF1Q8IYR6 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
TMEFF1Q8IYR6 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC26.39■■□□□ 1.82
TMEFF1Q8IYR6 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
TMEFF1Q8IYR6 EI24-212ENST00000615917 1407 ntTSL 2 BASIC26.39■■□□□ 1.81
TMEFF1Q8IYR6 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
TMEFF1Q8IYR6 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC26.38■■□□□ 1.81
TMEFF1Q8IYR6 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC26.38■■□□□ 1.81
TMEFF1Q8IYR6 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC26.38■■□□□ 1.81
TMEFF1Q8IYR6 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC26.37■■□□□ 1.81
TMEFF1Q8IYR6 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
TMEFF1Q8IYR6 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
TMEFF1Q8IYR6 CHML-204ENST00000638121 920 ntTSL 2 BASIC26.35■■□□□ 1.81
TMEFF1Q8IYR6 AC120057.4-201ENST00000624722 1615 ntBASIC26.34■■□□□ 1.81
TMEFF1Q8IYR6 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TMEFF1Q8IYR6 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
TMEFF1Q8IYR6 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
TMEFF1Q8IYR6 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
TMEFF1Q8IYR6 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
TMEFF1Q8IYR6 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
TMEFF1Q8IYR6 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
TMEFF1Q8IYR6 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
TMEFF1Q8IYR6 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
TMEFF1Q8IYR6 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
TMEFF1Q8IYR6 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC26.3■■□□□ 1.8
TMEFF1Q8IYR6 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
TMEFF1Q8IYR6 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC26.29■■□□□ 1.8
TMEFF1Q8IYR6 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC26.29■■□□□ 1.8
TMEFF1Q8IYR6 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TMEFF1Q8IYR6 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC26.28■■□□□ 1.8
TMEFF1Q8IYR6 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC26.27■■□□□ 1.8
TMEFF1Q8IYR6 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TMEFF1Q8IYR6 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC26.26■■□□□ 1.79
TMEFF1Q8IYR6 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
TMEFF1Q8IYR6 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
TMEFF1Q8IYR6 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC26.24■■□□□ 1.79
TMEFF1Q8IYR6 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
TMEFF1Q8IYR6 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC26.23■■□□□ 1.79
TMEFF1Q8IYR6 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC26.22■■□□□ 1.79
TMEFF1Q8IYR6 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
TMEFF1Q8IYR6 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
TMEFF1Q8IYR6 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
TMEFF1Q8IYR6 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
TMEFF1Q8IYR6 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
TMEFF1Q8IYR6 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
TMEFF1Q8IYR6 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
TMEFF1Q8IYR6 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
TMEFF1Q8IYR6 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
TMEFF1Q8IYR6 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
TMEFF1Q8IYR6 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
TMEFF1Q8IYR6 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
TMEFF1Q8IYR6 CHST11-202ENST00000546689 756 ntTSL 2 BASIC26.21■■□□□ 1.79
TMEFF1Q8IYR6 SRP68-213ENST00000629930 165 ntTSL 5 BASIC26.21■■□□□ 1.79
TMEFF1Q8IYR6 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC26.2■■□□□ 1.79
TMEFF1Q8IYR6 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC26.19■■□□□ 1.78
TMEFF1Q8IYR6 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
TMEFF1Q8IYR6 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
TMEFF1Q8IYR6 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC26.18■■□□□ 1.78
TMEFF1Q8IYR6 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC26.18■■□□□ 1.78
TMEFF1Q8IYR6 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
TMEFF1Q8IYR6 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC26.17■■□□□ 1.78
TMEFF1Q8IYR6 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
TMEFF1Q8IYR6 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
TMEFF1Q8IYR6 RARRES2P2-201ENST00000394842 485 ntBASIC26.16■■□□□ 1.78
TMEFF1Q8IYR6 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC26.16■■□□□ 1.78
TMEFF1Q8IYR6 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC26.16■■□□□ 1.78
TMEFF1Q8IYR6 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC26.15■■□□□ 1.78
TMEFF1Q8IYR6 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC26.15■■□□□ 1.78
TMEFF1Q8IYR6 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
TMEFF1Q8IYR6 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
TMEFF1Q8IYR6 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC26.14■■□□□ 1.78
TMEFF1Q8IYR6 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
TMEFF1Q8IYR6 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
TMEFF1Q8IYR6 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC26.14■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 9.6 ms