Protein–RNA interactions for Protein: Q08285

RRP40, Exosome complex component RRP40, yeastyeast

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP40Q08285 AIM1YAL046C 357 nt8.36□□□□□ -1.07
RRP40Q08285 YMR262WYMR262W 942 nt8.35□□□□□ -1.07
RRP40Q08285 PGC1YPL206C 966 nt8.35□□□□□ -1.07
RRP40Q08285 PAU5YFL020C 369 nt8.34□□□□□ -1.07
RRP40Q08285 POT1YIL160C 1254 nt8.34□□□□□ -1.07
RRP40Q08285 BET2YPR176C 978 nt8.34□□□□□ -1.07
RRP40Q08285 HIS2YFR025C 1008 nt8.33□□□□□ -1.08
RRP40Q08285 YFR036W-AYFR036W-A 651 nt8.33□□□□□ -1.08
RRP40Q08285 YHL008CYHL008C 1884 nt8.33□□□□□ -1.08
RRP40Q08285 DIG1YPL049C 1359 nt8.33□□□□□ -1.08
RRP40Q08285 GAL2YLR081W 1725 nt8.32□□□□□ -1.08
RRP40Q08285 ADE8YDR408C 645 nt8.32□□□□□ -1.08
RRP40Q08285 ARO8YGL202W 1503 nt8.32□□□□□ -1.08
RRP40Q08285 GTB1YDR221W 2109 nt8.32□□□□□ -1.08
RRP40Q08285 SPS100YHR139C 981 nt8.31□□□□□ -1.08
RRP40Q08285 ENT4YLL038C 744 nt8.31□□□□□ -1.08
RRP40Q08285 QDR2YIL121W 1629 nt8.3□□□□□ -1.08
RRP40Q08285 STP3YLR375W 1032 nt8.3□□□□□ -1.08
RRP40Q08285 GSF2YML048W 1212 nt8.3□□□□□ -1.08
RRP40Q08285 UGP1YKL035W 1500 nt8.29□□□□□ -1.08
RRP40Q08285 YBR232CYBR232C 360 nt8.29□□□□□ -1.08
RRP40Q08285 SAC7YDR389W 1965 nt8.29□□□□□ -1.08
RRP40Q08285 COQ8YGL119W 1506 nt8.29□□□□□ -1.08
RRP40Q08285 TUB4YLR212C 1422 nt8.28□□□□□ -1.08
RRP40Q08285 APS2YJR058C 444 nt8.27□□□□□ -1.09
RRP40Q08285 YJR114WYJR114W 393 nt8.27□□□□□ -1.09
RRP40Q08285 KES1YPL145C 1305 nt8.27□□□□□ -1.09
RRP40Q08285 TVP23YDR084C 600 nt8.26□□□□□ -1.09
RRP40Q08285 NIF3YGL221C 867 nt8.26□□□□□ -1.09
RRP40Q08285 YLR046CYLR046C 813 nt8.26□□□□□ -1.09
RRP40Q08285 PSD1YNL169C 1503 nt8.25□□□□□ -1.09
RRP40Q08285 OPI3YJR073C 621 nt8.25□□□□□ -1.09
RRP40Q08285 SGA1YIL099W 1650 nt8.23□□□□□ -1.09
RRP40Q08285 DLD3YEL071W 1491 nt8.22□□□□□ -1.09
RRP40Q08285 ABZ2YMR289W 1125 nt8.22□□□□□ -1.09
RRP40Q08285 PAR32YDL173W 888 nt8.21□□□□□ -1.1
RRP40Q08285 SEN2YLR105C 1134 nt8.21□□□□□ -1.1
RRP40Q08285 YNR064CYNR064C 873 nt8.21□□□□□ -1.1
RRP40Q08285 CYT1YOR065W 930 nt8.21□□□□□ -1.1
RRP40Q08285 GID8YMR135C 1368 nt8.21□□□□□ -1.1
RRP40Q08285 RFC1YOR217W 2586 nt8.19□□□□□ -1.1
RRP40Q08285 ZAP1YJL056C 2643 nt8.19□□□□□ -1.1
RRP40Q08285 ITR2YOL103W 1830 nt8.19□□□□□ -1.1
RRP40Q08285 YHR219WYHR219W 1875 nt8.17□□□□□ -1.1
RRP40Q08285 HXK1YFR053C 1458 nt8.16□□□□□ -1.1
RRP40Q08285 NAP1YKR048C 1254 nt8.16□□□□□ -1.1
RRP40Q08285 MRS6YOR370C 1812 nt8.16□□□□□ -1.1
RRP40Q08285 TOK1YJL093C 2076 nt8.15□□□□□ -1.1
RRP40Q08285 DMA2YNL116W 1569 nt8.15□□□□□ -1.1
RRP40Q08285 YKL133CYKL133C 1392 nt8.15□□□□□ -1.1
RRP40Q08285 ELO1YJL196C 933 nt8.15□□□□□ -1.1
RRP40Q08285 YJL064WYJL064W 396 nt8.14□□□□□ -1.11
RRP40Q08285 CDD1YLR245C 429 nt8.14□□□□□ -1.11
RRP40Q08285 AMF1YOR378W 1548 nt8.13□□□□□ -1.11
RRP40Q08285 PCP1YGR101W 1041 nt8.13□□□□□ -1.11
RRP40Q08285 NAS2YIL007C 663 nt8.13□□□□□ -1.11
RRP40Q08285 LSR1LSR1 1175 nt8.13□□□□□ -1.11
RRP40Q08285 ALD5YER073W 1563 nt8.13□□□□□ -1.11
RRP40Q08285 ENO2YHR174W 1314 nt8.12□□□□□ -1.11
RRP40Q08285 KEL3YPL263C 1956 nt8.12□□□□□ -1.11
RRP40Q08285 IGD1YFR017C 588 nt8.12□□□□□ -1.11
RRP40Q08285 PAU19YMR325W 375 nt8.12□□□□□ -1.11
RRP40Q08285 VMA11YPL234C 495 nt8.12□□□□□ -1.11
RRP40Q08285 SWT21YNL187W 1074 nt8.11□□□□□ -1.11
RRP40Q08285 HEM14YER014W 1620 nt8.11□□□□□ -1.11
RRP40Q08285 KRE1YNL322C 942 nt8.1□□□□□ -1.11
RRP40Q08285 PUP1YOR157C 786 nt8.1□□□□□ -1.11
RRP40Q08285 THP3YPR045C 1413 nt8.1□□□□□ -1.11
RRP40Q08285 YMR265CYMR265C 1386 nt8.1□□□□□ -1.11
RRP40Q08285 SFL1YOR140W 2301 nt8.09□□□□□ -1.11
RRP40Q08285 SUV3YPL029W 2214 nt8.09□□□□□ -1.11
RRP40Q08285 TPC1YGR096W 945 nt8.09□□□□□ -1.11
RRP40Q08285 TIP1YBR067C 633 nt8.09□□□□□ -1.11
RRP40Q08285 SPE2YOL052C 1191 nt8.08□□□□□ -1.12
RRP40Q08285 HAP5YOR358W 729 nt8.08□□□□□ -1.12
RRP40Q08285 RPD3YNL330C 1302 nt8.07□□□□□ -1.12
RRP40Q08285 FSH2YMR222C 672 nt8.07□□□□□ -1.12
RRP40Q08285 SSL2YIL143C 2532 nt8.06□□□□□ -1.12
RRP40Q08285 YHR218WYHR218W 1812 nt8.06□□□□□ -1.12
RRP40Q08285 LEU2YCL018W 1095 nt8.05□□□□□ -1.12
RRP40Q08285 MET1YKR069W 1782 nt8.05□□□□□ -1.12
RRP40Q08285 RPN14YGL004C 1254 nt8.04□□□□□ -1.12
RRP40Q08285 CWP2YKL096W-A 279 nt8.04□□□□□ -1.12
RRP40Q08285 snR31snR31 225 nt8.04□□□□□ -1.12
RRP40Q08285 CRC1YOR100C 984 nt8.03□□□□□ -1.12
RRP40Q08285 SNX3YOR357C 489 nt8.03□□□□□ -1.12
RRP40Q08285 NAM8YHR086W 1572 nt8.02□□□□□ -1.13
RRP40Q08285 tA(AGC)DtA(AGC)D 73 nt8.02□□□□□ -1.13
RRP40Q08285 tA(AGC)FtA(AGC)F 73 nt8.02□□□□□ -1.13
RRP40Q08285 tA(AGC)GtA(AGC)G 73 nt8.02□□□□□ -1.13
RRP40Q08285 tA(AGC)HtA(AGC)H 73 nt8.02□□□□□ -1.13
RRP40Q08285 tA(AGC)JtA(AGC)J 73 nt8.02□□□□□ -1.13
RRP40Q08285 tA(AGC)K1tA(AGC)K1 73 nt8.02□□□□□ -1.13
RRP40Q08285 tA(AGC)K2tA(AGC)K2 73 nt8.02□□□□□ -1.13
RRP40Q08285 tA(AGC)LtA(AGC)L 73 nt8.02□□□□□ -1.13
RRP40Q08285 tA(AGC)M1tA(AGC)M1 73 nt8.02□□□□□ -1.13
RRP40Q08285 tA(AGC)M2tA(AGC)M2 73 nt8.02□□□□□ -1.13
RRP40Q08285 tA(AGC)PtA(AGC)P 73 nt8.02□□□□□ -1.13
RRP40Q08285 ODC1YPL134C 933 nt8.02□□□□□ -1.13
RRP40Q08285 PHB2YGR231C 933 nt8□□□□□ -1.13
Retrieved 100 of 7,029 protein–RNA pairs in 16.8 ms