Protein–RNA interactions for Protein: Q04338

VTI1, t-SNARE VTI1, yeastyeast

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VTI1Q04338 TIM44YIL022W 1296 nt9.37□□□□□ -0.91
VTI1Q04338 MDM35YKL053C-A 261 nt9.37□□□□□ -0.91
VTI1Q04338 YHR218WYHR218W 1812 nt9.36□□□□□ -0.91
VTI1Q04338 TPO4YOR273C 1980 nt9.36□□□□□ -0.91
VTI1Q04338 YMR226CYMR226C 804 nt9.36□□□□□ -0.91
VTI1Q04338 CWP2YKL096W-A 279 nt9.35□□□□□ -0.91
VTI1Q04338 YMR244WYMR244W 1068 nt9.35□□□□□ -0.91
VTI1Q04338 TIP1YBR067C 633 nt9.35□□□□□ -0.91
VTI1Q04338 HXT12YIL170W 1374 nt9.35□□□□□ -0.91
VTI1Q04338 HXT10YFL011W 1641 nt9.33□□□□□ -0.92
VTI1Q04338 TMA23YMR269W 636 nt9.32□□□□□ -0.92
VTI1Q04338 RIB2YOL066C 1776 nt9.32□□□□□ -0.92
VTI1Q04338 YHL008CYHL008C 1884 nt9.32□□□□□ -0.92
VTI1Q04338 VMA11YPL234C 495 nt9.31□□□□□ -0.92
VTI1Q04338 RIB7YBR153W 735 nt9.31□□□□□ -0.92
VTI1Q04338 GAL3YDR009W 1563 nt9.31□□□□□ -0.92
VTI1Q04338 FRA1YLL029W 2250 nt9.31□□□□□ -0.92
VTI1Q04338 URA8YJR103W 1737 nt9.31□□□□□ -0.92
VTI1Q04338 SAC7YDR389W 1965 nt9.3□□□□□ -0.92
VTI1Q04338 YMR262WYMR262W 942 nt9.27□□□□□ -0.93
VTI1Q04338 SNX3YOR357C 489 nt9.27□□□□□ -0.93
VTI1Q04338 YPI1YFR003C 468 nt9.25□□□□□ -0.93
VTI1Q04338 IMO32YGR031W 1029 nt9.25□□□□□ -0.93
VTI1Q04338 ELO1YJL196C 933 nt9.24□□□□□ -0.93
VTI1Q04338 RPC31YNL151C 756 nt9.24□□□□□ -0.93
VTI1Q04338 GNP1YDR508C 1992 nt9.23□□□□□ -0.93
VTI1Q04338 RRT8YOL048C 1029 nt9.23□□□□□ -0.93
VTI1Q04338 ADE8YDR408C 645 nt9.21□□□□□ -0.94
VTI1Q04338 RIM2YBR192W 1134 nt9.21□□□□□ -0.94
VTI1Q04338 DPL1YDR294C 1770 nt9.21□□□□□ -0.94
VTI1Q04338 AGP3YFL055W 1677 nt9.2□□□□□ -0.94
VTI1Q04338 RBG2YGR173W 1107 nt9.2□□□□□ -0.94
VTI1Q04338 YJR114WYJR114W 393 nt9.19□□□□□ -0.94
VTI1Q04338 YNR029CYNR029C 1290 nt9.19□□□□□ -0.94
VTI1Q04338 YDR306CYDR306C 1437 nt9.19□□□□□ -0.94
VTI1Q04338 YNR064CYNR064C 873 nt9.18□□□□□ -0.94
VTI1Q04338 LEU4YNL104C 1860 nt9.17□□□□□ -0.94
VTI1Q04338 YMR265CYMR265C 1386 nt9.16□□□□□ -0.94
VTI1Q04338 YFR036W-AYFR036W-A 651 nt9.16□□□□□ -0.94
VTI1Q04338 KRR1YCL059C 951 nt9.15□□□□□ -0.94
VTI1Q04338 DAK2YFL053W 1776 nt9.14□□□□□ -0.95
VTI1Q04338 OPI3YJR073C 621 nt9.14□□□□□ -0.95
VTI1Q04338 SUV3YPL029W 2214 nt9.14□□□□□ -0.95
VTI1Q04338 SNZ1YMR096W 894 nt9.13□□□□□ -0.95
VTI1Q04338 ADH1YOL086C 1047 nt9.13□□□□□ -0.95
VTI1Q04338 HAP5YOR358W 729 nt9.13□□□□□ -0.95
VTI1Q04338 KEL3YPL263C 1956 nt9.12□□□□□ -0.95
VTI1Q04338 INH1YDL181W 258 nt9.11□□□□□ -0.95
VTI1Q04338 RPN14YGL004C 1254 nt9.1□□□□□ -0.95
VTI1Q04338 THI72YOR192C 1800 nt9.1□□□□□ -0.95
VTI1Q04338 NBA1YOL070C 1506 nt9.08□□□□□ -0.96
VTI1Q04338 SFL1YOR140W 2301 nt9.08□□□□□ -0.96
VTI1Q04338 TVP23YDR084C 600 nt9.07□□□□□ -0.96
VTI1Q04338 YDR467CYDR467C 327 nt9.07□□□□□ -0.96
VTI1Q04338 CRC1YOR100C 984 nt9.07□□□□□ -0.96
VTI1Q04338 NPP2YEL016C 1482 nt9.07□□□□□ -0.96
VTI1Q04338 YPR126CYPR126C 309 nt9.06□□□□□ -0.96
VTI1Q04338 ALD5YER073W 1563 nt9.04□□□□□ -0.96
VTI1Q04338 SPS100YHR139C 981 nt9.04□□□□□ -0.96
VTI1Q04338 MET1YKR069W 1782 nt9.04□□□□□ -0.96
VTI1Q04338 HXK1YFR053C 1458 nt9.03□□□□□ -0.96
VTI1Q04338 PUS7YOR243C 2031 nt9.02□□□□□ -0.97
VTI1Q04338 CCT5YJR064W 1689 nt9.02□□□□□ -0.97
VTI1Q04338 tE(CUC)DtE(CUC)D 72 nt9.02□□□□□ -0.97
VTI1Q04338 tE(CUC)ItE(CUC)I 72 nt9.02□□□□□ -0.97
VTI1Q04338 PCP1YGR101W 1041 nt9.02□□□□□ -0.97
VTI1Q04338 YOR072WYOR072W 315 nt9.02□□□□□ -0.97
VTI1Q04338 snR31snR31 225 nt9.02□□□□□ -0.97
VTI1Q04338 SWT21YNL187W 1074 nt9.01□□□□□ -0.97
VTI1Q04338 IML3YBR107C 738 nt9.01□□□□□ -0.97
VTI1Q04338 CTI6YPL181W 1521 nt9□□□□□ -0.97
VTI1Q04338 FET5YFL041W 1869 nt8.99□□□□□ -0.97
VTI1Q04338 ENO2YHR174W 1314 nt8.99□□□□□ -0.97
VTI1Q04338 KGD2YDR148C 1392 nt8.99□□□□□ -0.97
VTI1Q04338 YKL053WYKL053W 375 nt8.98□□□□□ -0.97
VTI1Q04338 GPM1YKL152C 744 nt8.97□□□□□ -0.97
VTI1Q04338 ABZ2YMR289W 1125 nt8.97□□□□□ -0.97
VTI1Q04338 YLR173WYLR173W 1827 nt8.96□□□□□ -0.98
VTI1Q04338 AMF1YOR378W 1548 nt8.95□□□□□ -0.98
VTI1Q04338 YRF1-2YER190W 5046 nt8.95□□□□□ -0.98
VTI1Q04338 YJL195CYJL195C 702 nt8.95□□□□□ -0.98
VTI1Q04338 NSG2YNL156C 900 nt8.95□□□□□ -0.98
VTI1Q04338 tD(GUC)BtD(GUC)B 72 nt8.94□□□□□ -0.98
VTI1Q04338 tD(GUC)DtD(GUC)D 72 nt8.94□□□□□ -0.98
VTI1Q04338 tD(GUC)G1tD(GUC)G1 72 nt8.94□□□□□ -0.98
VTI1Q04338 tD(GUC)G2tD(GUC)G2 72 nt8.94□□□□□ -0.98
VTI1Q04338 tD(GUC)I1tD(GUC)I1 72 nt8.94□□□□□ -0.98
VTI1Q04338 tD(GUC)I2tD(GUC)I2 72 nt8.94□□□□□ -0.98
VTI1Q04338 tD(GUC)J1tD(GUC)J1 72 nt8.94□□□□□ -0.98
VTI1Q04338 tD(GUC)J2tD(GUC)J2 72 nt8.94□□□□□ -0.98
VTI1Q04338 tD(GUC)J3tD(GUC)J3 72 nt8.94□□□□□ -0.98
VTI1Q04338 tD(GUC)J4tD(GUC)J4 72 nt8.94□□□□□ -0.98
VTI1Q04338 tD(GUC)KtD(GUC)K 72 nt8.94□□□□□ -0.98
VTI1Q04338 tD(GUC)L1tD(GUC)L1 72 nt8.94□□□□□ -0.98
VTI1Q04338 tD(GUC)L2tD(GUC)L2 72 nt8.94□□□□□ -0.98
VTI1Q04338 tD(GUC)MtD(GUC)M 72 nt8.94□□□□□ -0.98
VTI1Q04338 tD(GUC)OtD(GUC)O 72 nt8.94□□□□□ -0.98
VTI1Q04338 YBL095WYBL095W 813 nt8.94□□□□□ -0.98
VTI1Q04338 MTO1YGL236C 2010 nt8.93□□□□□ -0.98
VTI1Q04338 TRP2YER090W 1524 nt8.93□□□□□ -0.98
Retrieved 100 of 7,029 protein–RNA pairs in 63.6 ms