Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
PRKDCP78527 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRKDCP78527 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRKDCP78527 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PRKDCP78527 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRKDCP78527 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PRKDCP78527 AL033527.3-201ENST00000566366 1196 ntBASIC19.83■□□□□ 0.77
PRKDCP78527 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PRKDCP78527 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PRKDCP78527 AL035685.1-201ENST00000636663 812 ntBASIC19.82■□□□□ 0.76
PRKDCP78527 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.82■□□□□ 0.76
PRKDCP78527 AC008813.1-201ENST00000536597 885 ntBASIC19.81■□□□□ 0.76
PRKDCP78527 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC19.81■□□□□ 0.76
PRKDCP78527 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PRKDCP78527 RARRES2P1-201ENST00000474487 481 ntBASIC19.8■□□□□ 0.76
PRKDCP78527 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC19.8■□□□□ 0.76
PRKDCP78527 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC19.8■□□□□ 0.76
PRKDCP78527 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC19.8■□□□□ 0.76
PRKDCP78527 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.8■□□□□ 0.76
PRKDCP78527 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
PRKDCP78527 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PRKDCP78527 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC19.78■□□□□ 0.76
PRKDCP78527 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PRKDCP78527 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
PRKDCP78527 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PRKDCP78527 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PRKDCP78527 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.77■□□□□ 0.76
PRKDCP78527 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC19.77■□□□□ 0.75
PRKDCP78527 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PRKDCP78527 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PRKDCP78527 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PRKDCP78527 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PRKDCP78527 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PRKDCP78527 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC19.75■□□□□ 0.75
PRKDCP78527 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.74■□□□□ 0.75
PRKDCP78527 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
PRKDCP78527 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.74■□□□□ 0.75
PRKDCP78527 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PRKDCP78527 CEP120-209ENST00000515110 606 ntTSL 3 BASIC19.73■□□□□ 0.75
PRKDCP78527 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
PRKDCP78527 TSPY13P-201ENST00000338964 914 ntBASIC19.72■□□□□ 0.75
PRKDCP78527 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.72■□□□□ 0.75
PRKDCP78527 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PRKDCP78527 CHML-204ENST00000638121 920 ntTSL 2 BASIC19.7■□□□□ 0.74
PRKDCP78527 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
PRKDCP78527 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PRKDCP78527 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.69■□□□□ 0.74
PRKDCP78527 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.69■□□□□ 0.74
PRKDCP78527 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PRKDCP78527 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PRKDCP78527 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC19.68■□□□□ 0.74
PRKDCP78527 AL451085.2-201ENST00000605085 799 ntBASIC19.68■□□□□ 0.74
PRKDCP78527 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
PRKDCP78527 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRKDCP78527 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PRKDCP78527 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRKDCP78527 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRKDCP78527 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PRKDCP78527 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
PRKDCP78527 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRKDCP78527 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRKDCP78527 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC19.65■□□□□ 0.74
PRKDCP78527 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRKDCP78527 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC19.63■□□□□ 0.73
PRKDCP78527 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.63■□□□□ 0.73
PRKDCP78527 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRKDCP78527 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRKDCP78527 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PRKDCP78527 AC004987.1-201ENST00000428627 508 ntBASIC19.61■□□□□ 0.73
PRKDCP78527 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC19.61■□□□□ 0.73
PRKDCP78527 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.61■□□□□ 0.73
PRKDCP78527 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC19.6■□□□□ 0.73
PRKDCP78527 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
PRKDCP78527 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRKDCP78527 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PRKDCP78527 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PRKDCP78527 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRKDCP78527 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.59■□□□□ 0.73
PRKDCP78527 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PRKDCP78527 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PRKDCP78527 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PRKDCP78527 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
PRKDCP78527 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.57■□□□□ 0.72
PRKDCP78527 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PRKDCP78527 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.56■□□□□ 0.72
PRKDCP78527 ATP5G2P3-201ENST00000429083 425 ntBASIC19.56■□□□□ 0.72
PRKDCP78527 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.56■□□□□ 0.72
PRKDCP78527 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC19.55■□□□□ 0.72
PRKDCP78527 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.55■□□□□ 0.72
PRKDCP78527 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRKDCP78527 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC19.55■□□□□ 0.72
PRKDCP78527 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.55■□□□□ 0.72
PRKDCP78527 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
PRKDCP78527 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
PRKDCP78527 U85056.1-201ENST00000616429 682 ntBASIC19.54■□□□□ 0.72
PRKDCP78527 MIR935-201ENST00000401179 91 ntBASIC19.53■□□□□ 0.72
PRKDCP78527 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC19.53■□□□□ 0.72
PRKDCP78527 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRKDCP78527 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PRKDCP78527 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms