Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
ABCA4P78363 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC22.92■■□□□ 1.26
ABCA4P78363 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
ABCA4P78363 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC22.91■■□□□ 1.26
ABCA4P78363 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC22.91■■□□□ 1.26
ABCA4P78363 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
ABCA4P78363 DUX4L13-201ENST00000554103 1267 ntBASIC22.9■■□□□ 1.26
ABCA4P78363 DUX4L15-201ENST00000611059 1267 ntBASIC22.9■■□□□ 1.26
ABCA4P78363 DUX4L23-201ENST00000615195 1269 ntBASIC22.9■■□□□ 1.26
ABCA4P78363 DUX4L24-201ENST00000617576 1269 ntBASIC22.9■■□□□ 1.26
ABCA4P78363 DUX4L22-201ENST00000618238 1269 ntBASIC22.9■■□□□ 1.26
ABCA4P78363 DUX4L20-201ENST00000619712 1269 ntBASIC22.9■■□□□ 1.26
ABCA4P78363 DUX4L21-201ENST00000622058 1269 ntBASIC22.9■■□□□ 1.26
ABCA4P78363 DUX4L10-201ENST00000622460 1267 ntBASIC22.9■■□□□ 1.26
ABCA4P78363 DUX4L25-201ENST00000624915 1269 ntBASIC22.9■■□□□ 1.26
ABCA4P78363 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
ABCA4P78363 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
ABCA4P78363 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC22.89■■□□□ 1.26
ABCA4P78363 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
ABCA4P78363 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
ABCA4P78363 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
ABCA4P78363 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
ABCA4P78363 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC22.88■■□□□ 1.25
ABCA4P78363 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
ABCA4P78363 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
ABCA4P78363 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
ABCA4P78363 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
ABCA4P78363 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC22.86■■□□□ 1.25
ABCA4P78363 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC22.86■■□□□ 1.25
ABCA4P78363 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
ABCA4P78363 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
ABCA4P78363 ABHD17AP3-201ENST00000503096 1137 ntBASIC22.85■■□□□ 1.25
ABCA4P78363 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC22.84■■□□□ 1.25
ABCA4P78363 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
ABCA4P78363 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC22.84■■□□□ 1.25
ABCA4P78363 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
ABCA4P78363 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
ABCA4P78363 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
ABCA4P78363 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
ABCA4P78363 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC22.8■■□□□ 1.24
ABCA4P78363 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC22.8■■□□□ 1.24
ABCA4P78363 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
ABCA4P78363 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
ABCA4P78363 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC22.78■■□□□ 1.24
ABCA4P78363 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC22.77■■□□□ 1.24
ABCA4P78363 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
ABCA4P78363 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
ABCA4P78363 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC22.77■■□□□ 1.24
ABCA4P78363 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC22.77■■□□□ 1.23
ABCA4P78363 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC22.77■■□□□ 1.23
ABCA4P78363 SRP68-213ENST00000629930 165 ntTSL 5 BASIC22.77■■□□□ 1.23
ABCA4P78363 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC22.76■■□□□ 1.23
ABCA4P78363 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
ABCA4P78363 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
ABCA4P78363 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC22.74■■□□□ 1.23
ABCA4P78363 EI24-212ENST00000615917 1407 ntTSL 2 BASIC22.74■■□□□ 1.23
ABCA4P78363 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC22.74■■□□□ 1.23
ABCA4P78363 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC22.74■■□□□ 1.23
ABCA4P78363 METRNL-202ENST00000570778 967 ntTSL 5 BASIC22.73■■□□□ 1.23
ABCA4P78363 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
ABCA4P78363 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
ABCA4P78363 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
ABCA4P78363 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC22.72■■□□□ 1.23
ABCA4P78363 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC22.71■■□□□ 1.23
ABCA4P78363 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
ABCA4P78363 RARRES2P2-201ENST00000394842 485 ntBASIC22.71■■□□□ 1.23
ABCA4P78363 AC120057.4-201ENST00000624722 1615 ntBASIC22.71■■□□□ 1.23
ABCA4P78363 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
ABCA4P78363 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
ABCA4P78363 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC22.68■■□□□ 1.22
ABCA4P78363 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
ABCA4P78363 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
ABCA4P78363 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
ABCA4P78363 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
ABCA4P78363 HES6-205ENST00000409356 528 ntTSL 2 BASIC22.65■■□□□ 1.22
ABCA4P78363 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
ABCA4P78363 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
ABCA4P78363 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
ABCA4P78363 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
ABCA4P78363 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
ABCA4P78363 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC22.64■■□□□ 1.21
ABCA4P78363 CHML-204ENST00000638121 920 ntTSL 2 BASIC22.63■■□□□ 1.21
ABCA4P78363 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
ABCA4P78363 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ABCA4P78363 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC22.62■■□□□ 1.21
ABCA4P78363 ABHD17AP5-201ENST00000580133 923 ntBASIC22.61■■□□□ 1.21
ABCA4P78363 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
ABCA4P78363 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC22.6■■□□□ 1.21
ABCA4P78363 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
ABCA4P78363 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
ABCA4P78363 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
ABCA4P78363 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC22.59■■□□□ 1.21
ABCA4P78363 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC22.58■■□□□ 1.21
ABCA4P78363 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
ABCA4P78363 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
ABCA4P78363 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
ABCA4P78363 AL161658.1-201ENST00000623641 1967 ntBASIC22.57■■□□□ 1.2
ABCA4P78363 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
ABCA4P78363 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC22.56■■□□□ 1.2
ABCA4P78363 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms