Protein–RNA interactions for Protein: P43588

RPN11, Ubiquitin carboxyl-terminal hydrolase RPN11, yeastyeast

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN11P43588 SPE2YOL052C 1191 nt11.08□□□□□ -0.64
RPN11P43588 YPL247CYPL247C 1572 nt11.07□□□□□ -0.64
RPN11P43588 MOB1YIL106W 945 nt11.06□□□□□ -0.64
RPN11P43588 TGA1tA(UGC)A 73 nt11.05□□□□□ -0.64
RPN11P43588 tA(UGC)EtA(UGC)E 73 nt11.05□□□□□ -0.64
RPN11P43588 tA(UGC)GtA(UGC)G 73 nt11.05□□□□□ -0.64
RPN11P43588 tA(UGC)LtA(UGC)L 73 nt11.05□□□□□ -0.64
RPN11P43588 tA(UGC)OtA(UGC)O 73 nt11.05□□□□□ -0.64
RPN11P43588 SHY1YGR112W 1170 nt11.05□□□□□ -0.64
RPN11P43588 MRP1YDR347W 966 nt11.04□□□□□ -0.64
RPN11P43588 BET2YPR176C 978 nt11.04□□□□□ -0.64
RPN11P43588 FSH2YMR222C 672 nt11.03□□□□□ -0.64
RPN11P43588 YJL225CYJL225C 5277 nt11.02□□□□□ -0.65
RPN11P43588 LSM5YER146W 282 nt11.02□□□□□ -0.65
RPN11P43588 EMC3YKL207W 762 nt11.02□□□□□ -0.65
RPN11P43588 ABZ2YMR289W 1125 nt11.01□□□□□ -0.65
RPN11P43588 FCY1YPR062W 477 nt11.01□□□□□ -0.65
RPN11P43588 SDH8YBR269C 417 nt11.01□□□□□ -0.65
RPN11P43588 YGR210CYGR210C 1236 nt10.99□□□□□ -0.65
RPN11P43588 BAP3YDR046C 1815 nt10.98□□□□□ -0.65
RPN11P43588 DLD2YDL178W 1593 nt10.98□□□□□ -0.65
RPN11P43588 URA6YKL024C 615 nt10.97□□□□□ -0.65
RPN11P43588 PRE5YMR314W 705 nt10.97□□□□□ -0.65
RPN11P43588 tL(UAA)B1tL(UAA)B1 84 nt10.96□□□□□ -0.65
RPN11P43588 tL(UAA)B2tL(UAA)B2 84 nt10.96□□□□□ -0.65
RPN11P43588 tL(UAA)DtL(UAA)D 84 nt10.96□□□□□ -0.65
RPN11P43588 SUP51tL(UAA)J 84 nt10.96□□□□□ -0.65
RPN11P43588 tL(UAA)KtL(UAA)K 84 nt10.96□□□□□ -0.65
RPN11P43588 tL(UAA)LtL(UAA)L 84 nt10.96□□□□□ -0.65
RPN11P43588 tL(UAA)NtL(UAA)N 84 nt10.96□□□□□ -0.65
RPN11P43588 FLR1YBR008C 1647 nt10.95□□□□□ -0.66
RPN11P43588 OSH7YHR001W 1314 nt10.94□□□□□ -0.66
RPN11P43588 SOL2YCR073W-A 948 nt10.94□□□□□ -0.66
RPN11P43588 TVP23YDR084C 600 nt10.93□□□□□ -0.66
RPN11P43588 YJL160CYJL160C 864 nt10.92□□□□□ -0.66
RPN11P43588 PET8YNL003C 855 nt10.92□□□□□ -0.66
RPN11P43588 RRT8YOL048C 1029 nt10.92□□□□□ -0.66
RPN11P43588 PRP4YPR178W 1398 nt10.9□□□□□ -0.66
RPN11P43588 ADE8YDR408C 645 nt10.9□□□□□ -0.66
RPN11P43588 SRP102YKL154W 735 nt10.9□□□□□ -0.66
RPN11P43588 YMR210WYMR210W 1350 nt10.89□□□□□ -0.67
RPN11P43588 ZRT3YKL175W 1512 nt10.89□□□□□ -0.67
RPN11P43588 ERO1YML130C 1692 nt10.89□□□□□ -0.67
RPN11P43588 YDR455CYDR455C 309 nt10.88□□□□□ -0.67
RPN11P43588 DIG1YPL049C 1359 nt10.87□□□□□ -0.67
RPN11P43588 YKR012CYKR012C 378 nt10.85□□□□□ -0.67
RPN11P43588 YPL108WYPL108W 507 nt10.85□□□□□ -0.67
RPN11P43588 GDH1YOR375C 1365 nt10.85□□□□□ -0.67
RPN11P43588 TAT2YOL020W 1779 nt10.83□□□□□ -0.68
RPN11P43588 DPS1YLL018C 1674 nt10.83□□□□□ -0.68
RPN11P43588 HEM13YDR044W 987 nt10.83□□□□□ -0.68
RPN11P43588 TPC1YGR096W 945 nt10.83□□□□□ -0.68
RPN11P43588 YLR280CYLR280C 351 nt10.83□□□□□ -0.68
RPN11P43588 YPS3YLR121C 1527 nt10.83□□□□□ -0.68
RPN11P43588 OPI3YJR073C 621 nt10.79□□□□□ -0.68
RPN11P43588 RDN37-1RDN37-1 5354 nt10.79□□□□□ -0.68
RPN11P43588 RDN37-2RDN37-2 5354 nt10.79□□□□□ -0.68
RPN11P43588 ENO2YHR174W 1314 nt10.79□□□□□ -0.68
RPN11P43588 SDS24YBR214W 1584 nt10.78□□□□□ -0.68
RPN11P43588 ENO1YGR254W 1314 nt10.78□□□□□ -0.68
RPN11P43588 FMS1YMR020W 1527 nt10.78□□□□□ -0.68
RPN11P43588 ERG13YML126C 1476 nt10.76□□□□□ -0.69
RPN11P43588 PAC11YDR488C 1602 nt10.76□□□□□ -0.69
RPN11P43588 ASP3-1YLR155C 1089 nt10.75□□□□□ -0.69
RPN11P43588 ASP3-2YLR157C 1089 nt10.75□□□□□ -0.69
RPN11P43588 ASP3-3YLR158C 1089 nt10.75□□□□□ -0.69
RPN11P43588 ASP3-4YLR160C 1089 nt10.75□□□□□ -0.69
RPN11P43588 RIM2YBR192W 1134 nt10.75□□□□□ -0.69
RPN11P43588 ADA2YDR448W 1305 nt10.74□□□□□ -0.69
RPN11P43588 AMF1YOR378W 1548 nt10.74□□□□□ -0.69
RPN11P43588 VBA3YCL069W 1377 nt10.71□□□□□ -0.69
RPN11P43588 TAD2YJL035C 753 nt10.69□□□□□ -0.7
RPN11P43588 LEU2YCL018W 1095 nt10.69□□□□□ -0.7
RPN11P43588 LSB6YJL100W 1824 nt10.69□□□□□ -0.7
RPN11P43588 COS10YNR075W 1125 nt10.68□□□□□ -0.7
RPN11P43588 SPP2YOR148C 558 nt10.67□□□□□ -0.7
RPN11P43588 SNF1YDR477W 1902 nt10.66□□□□□ -0.7
RPN11P43588 PET18YCR020C 648 nt10.66□□□□□ -0.7
RPN11P43588 NAM8YHR086W 1572 nt10.65□□□□□ -0.7
RPN11P43588 UTR5YEL035C 501 nt10.65□□□□□ -0.7
RPN11P43588 FUS3YBL016W 1062 nt10.64□□□□□ -0.71
RPN11P43588 ELP4YPL101W 1371 nt10.63□□□□□ -0.71
RPN11P43588 PET494YNR045W 1470 nt10.61□□□□□ -0.71
RPN11P43588 ADE1YAR015W 921 nt10.61□□□□□ -0.71
RPN11P43588 RPR1RPR1 369 nt10.61□□□□□ -0.71
RPN11P43588 YJR149WYJR149W 1215 nt10.6□□□□□ -0.71
RPN11P43588 YBL095WYBL095W 813 nt10.59□□□□□ -0.71
RPN11P43588 LSP1YPL004C 1026 nt10.59□□□□□ -0.71
RPN11P43588 YJL043WYJL043W 774 nt10.58□□□□□ -0.72
RPN11P43588 MFT1YML062C 1179 nt10.58□□□□□ -0.72
RPN11P43588 ACH1YBL015W 1581 nt10.57□□□□□ -0.72
RPN11P43588 SAC7YDR389W 1965 nt10.57□□□□□ -0.72
RPN11P43588 KGD2YDR148C 1392 nt10.54□□□□□ -0.72
RPN11P43588 SPG1YGR236C 288 nt10.53□□□□□ -0.72
RPN11P43588 REX2YLR059C 810 nt10.53□□□□□ -0.72
RPN11P43588 YFR020WYFR020W 699 nt10.52□□□□□ -0.73
RPN11P43588 YJL067WYJL067W 351 nt10.51□□□□□ -0.73
RPN11P43588 YMR166CYMR166C 1107 nt10.51□□□□□ -0.73
RPN11P43588 YNR064CYNR064C 873 nt10.49□□□□□ -0.73
RPN11P43588 YER156CYER156C 1017 nt10.48□□□□□ -0.73
Retrieved 100 of 7,029 protein–RNA pairs in 63.6 ms