Protein–RNA interactions for Protein: P43321

SMD3, Small nuclear ribonucleoprotein Sm D3, yeastyeast

Known RBP Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SMD3P43321 tD(GUC)I1tD(GUC)I1 72 nt7.26□□□□□ -1.25
SMD3P43321 tD(GUC)I2tD(GUC)I2 72 nt7.26□□□□□ -1.25
SMD3P43321 tD(GUC)J1tD(GUC)J1 72 nt7.26□□□□□ -1.25
SMD3P43321 tD(GUC)J2tD(GUC)J2 72 nt7.26□□□□□ -1.25
SMD3P43321 tD(GUC)J3tD(GUC)J3 72 nt7.26□□□□□ -1.25
SMD3P43321 tD(GUC)J4tD(GUC)J4 72 nt7.26□□□□□ -1.25
SMD3P43321 tD(GUC)KtD(GUC)K 72 nt7.26□□□□□ -1.25
SMD3P43321 tD(GUC)L1tD(GUC)L1 72 nt7.26□□□□□ -1.25
SMD3P43321 tD(GUC)L2tD(GUC)L2 72 nt7.26□□□□□ -1.25
SMD3P43321 tD(GUC)MtD(GUC)M 72 nt7.26□□□□□ -1.25
SMD3P43321 tD(GUC)OtD(GUC)O 72 nt7.26□□□□□ -1.25
SMD3P43321 DPL1YDR294C 1770 nt7.25□□□□□ -1.25
SMD3P43321 LSM5YER146W 282 nt7.25□□□□□ -1.25
SMD3P43321 OYE2YHR179W 1203 nt7.25□□□□□ -1.25
SMD3P43321 PRY1YJL079C 900 nt7.24□□□□□ -1.25
SMD3P43321 YDR455CYDR455C 309 nt7.23□□□□□ -1.25
SMD3P43321 EAF3YPR023C 1206 nt7.23□□□□□ -1.25
SMD3P43321 RPT5YOR117W 1305 nt7.23□□□□□ -1.25
SMD3P43321 YDR467CYDR467C 327 nt7.22□□□□□ -1.25
SMD3P43321 UBX6YJL048C 1191 nt7.22□□□□□ -1.25
SMD3P43321 YPL222C-AYPL222C-A 246 nt7.22□□□□□ -1.25
SMD3P43321 ERG13YML126C 1476 nt7.22□□□□□ -1.25
SMD3P43321 TPN1YGL186C 1740 nt7.21□□□□□ -1.26
SMD3P43321 NPP2YEL016C 1482 nt7.2□□□□□ -1.26
SMD3P43321 GND1YHR183W 1470 nt7.2□□□□□ -1.26
SMD3P43321 HBS1YKR084C 1836 nt7.2□□□□□ -1.26
SMD3P43321 FET5YFL041W 1869 nt7.18□□□□□ -1.26
SMD3P43321 RPN14YGL004C 1254 nt7.18□□□□□ -1.26
SMD3P43321 UFD1YGR048W 1086 nt7.17□□□□□ -1.26
SMD3P43321 SAM3YPL274W 1764 nt7.17□□□□□ -1.26
SMD3P43321 YMR265CYMR265C 1386 nt7.17□□□□□ -1.26
SMD3P43321 SAC7YDR389W 1965 nt7.17□□□□□ -1.26
SMD3P43321 tE(CUC)DtE(CUC)D 72 nt7.16□□□□□ -1.26
SMD3P43321 tE(CUC)ItE(CUC)I 72 nt7.16□□□□□ -1.26
SMD3P43321 DDI1YER143W 1287 nt7.16□□□□□ -1.26
SMD3P43321 SMM1YNR015W 1155 nt7.16□□□□□ -1.26
SMD3P43321 TPS1YBR126C 1488 nt7.16□□□□□ -1.26
SMD3P43321 LPD1YFL018C 1500 nt7.16□□□□□ -1.26
SMD3P43321 DAK2YFL053W 1776 nt7.15□□□□□ -1.26
SMD3P43321 TOM71YHR117W 1920 nt7.14□□□□□ -1.27
SMD3P43321 YJL118WYJL118W 660 nt7.14□□□□□ -1.27
SMD3P43321 ELO1YJL196C 933 nt7.14□□□□□ -1.27
SMD3P43321 ORT1YOR130C 879 nt7.14□□□□□ -1.27
SMD3P43321 HAP5YOR358W 729 nt7.14□□□□□ -1.27
SMD3P43321 BSP1YPR171W 1731 nt7.14□□□□□ -1.27
SMD3P43321 RAD23YEL037C 1197 nt7.13□□□□□ -1.27
SMD3P43321 YNR064CYNR064C 873 nt7.13□□□□□ -1.27
SMD3P43321 TRP2YER090W 1524 nt7.12□□□□□ -1.27
SMD3P43321 LOT5YKL183W 921 nt7.12□□□□□ -1.27
SMD3P43321 FIT1YDR534C 1587 nt7.12□□□□□ -1.27
SMD3P43321 FRE6YLL051C 2139 nt7.11□□□□□ -1.27
SMD3P43321 YBL095WYBL095W 813 nt7.11□□□□□ -1.27
SMD3P43321 RRT8YOL048C 1029 nt7.11□□□□□ -1.27
SMD3P43321 RIB7YBR153W 735 nt7.11□□□□□ -1.27
SMD3P43321 THI6YPL214C 1623 nt7.11□□□□□ -1.27
SMD3P43321 YIL177CYIL177C 5277 nt7.11□□□□□ -1.27
SMD3P43321 ALR1YOL130W 2580 nt7.1□□□□□ -1.27
SMD3P43321 TMA23YMR269W 636 nt7.1□□□□□ -1.27
SMD3P43321 DUR3YHL016C 2208 nt7.1□□□□□ -1.27
SMD3P43321 KEL3YPL263C 1956 nt7.09□□□□□ -1.27
SMD3P43321 EMC3YKL207W 762 nt7.09□□□□□ -1.27
SMD3P43321 HXT11YOL156W 1704 nt7.08□□□□□ -1.28
SMD3P43321 YJR114WYJR114W 393 nt7.08□□□□□ -1.28
SMD3P43321 GPM1YKL152C 744 nt7.08□□□□□ -1.28
SMD3P43321 YMC2YBR104W 990 nt7.08□□□□□ -1.28
SMD3P43321 snR31snR31 225 nt7.08□□□□□ -1.28
SMD3P43321 snR4snR4 186 nt7.08□□□□□ -1.28
SMD3P43321 SUV3YPL029W 2214 nt7.07□□□□□ -1.28
SMD3P43321 ADE8YDR408C 645 nt7.07□□□□□ -1.28
SMD3P43321 IMO32YGR031W 1029 nt7.07□□□□□ -1.28
SMD3P43321 AAT1YKL106W 1356 nt7.07□□□□□ -1.28
SMD3P43321 VRG4YGL225W 1014 nt7.06□□□□□ -1.28
SMD3P43321 YJL055WYJL055W 738 nt7.06□□□□□ -1.28
SMD3P43321 LSB3YFR024C-A 1380 nt7.05□□□□□ -1.28
SMD3P43321 HXT12YIL170W 1374 nt7.05□□□□□ -1.28
SMD3P43321 ADE16YLR028C 1776 nt7.05□□□□□ -1.28
SMD3P43321 SFL1YOR140W 2301 nt7.04□□□□□ -1.28
SMD3P43321 RIB3YDR487C 627 nt7.04□□□□□ -1.28
SMD3P43321 POP2YNR052C 1302 nt7.03□□□□□ -1.28
SMD3P43321 YLR111WYLR111W 333 nt7.03□□□□□ -1.28
SMD3P43321 DUS3YLR401C 2007 nt7.03□□□□□ -1.28
SMD3P43321 CRC1YOR100C 984 nt7.02□□□□□ -1.29
SMD3P43321 SRM1YGL097W 1449 nt7.01□□□□□ -1.29
SMD3P43321 YMR210WYMR210W 1350 nt7□□□□□ -1.29
SMD3P43321 YRF1-3YGR296W 5580 nt7□□□□□ -1.29
SMD3P43321 YRF1-6YNL339C 5580 nt7□□□□□ -1.29
SMD3P43321 YRF1-7YPL283C 5580 nt7□□□□□ -1.29
SMD3P43321 FRA1YLL029W 2250 nt7□□□□□ -1.29
SMD3P43321 GAL3YDR009W 1563 nt6.99□□□□□ -1.29
SMD3P43321 HEM14YER014W 1620 nt6.99□□□□□ -1.29
SMD3P43321 GGA2YHR108W 1758 nt6.99□□□□□ -1.29
SMD3P43321 OPI3YJR073C 621 nt6.98□□□□□ -1.29
SMD3P43321 MRS4YKR052C 915 nt6.98□□□□□ -1.29
SMD3P43321 MET30YIL046W 1923 nt6.97□□□□□ -1.29
SMD3P43321 DIA4YHR011W 1341 nt6.97□□□□□ -1.29
SMD3P43321 FTH1YBR207W 1398 nt6.96□□□□□ -1.29
SMD3P43321 MET1YKR069W 1782 nt6.96□□□□□ -1.3
SMD3P43321 THI3YDL080C 1830 nt6.95□□□□□ -1.3
SMD3P43321 NSG2YNL156C 900 nt6.95□□□□□ -1.3
SMD3P43321 YNL190WYNL190W 615 nt6.95□□□□□ -1.3
Retrieved 100 of 7,029 protein–RNA pairs in 12.3 ms