Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.29■□□□□ 0.84
Hoxa3P02831 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hoxa3P02831 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.29■□□□□ 0.84
Hoxa3P02831 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hoxa3P02831 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hoxa3P02831 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hoxa3P02831 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hoxa3P02831 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Hoxa3P02831 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxa3P02831 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxa3P02831 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxa3P02831 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hoxa3P02831 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hoxa3P02831 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Hoxa3P02831 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hoxa3P02831 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hoxa3P02831 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.24■□□□□ 0.83
Hoxa3P02831 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hoxa3P02831 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hoxa3P02831 Nkain2-201ENSMUST00000092602 558 ntBASIC20.23■□□□□ 0.83
Hoxa3P02831 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hoxa3P02831 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hoxa3P02831 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Hoxa3P02831 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hoxa3P02831 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hoxa3P02831 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hoxa3P02831 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.2■□□□□ 0.82
Hoxa3P02831 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.2■□□□□ 0.82
Hoxa3P02831 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hoxa3P02831 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Hoxa3P02831 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
Hoxa3P02831 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
Hoxa3P02831 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.17■□□□□ 0.82
Hoxa3P02831 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.17■□□□□ 0.82
Hoxa3P02831 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hoxa3P02831 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Hoxa3P02831 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Hoxa3P02831 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Hoxa3P02831 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.15■□□□□ 0.82
Hoxa3P02831 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Hoxa3P02831 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
Hoxa3P02831 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hoxa3P02831 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hoxa3P02831 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hoxa3P02831 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Hoxa3P02831 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.13■□□□□ 0.81
Hoxa3P02831 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Hoxa3P02831 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Hoxa3P02831 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hoxa3P02831 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.12■□□□□ 0.81
Hoxa3P02831 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Hoxa3P02831 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Hoxa3P02831 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hoxa3P02831 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hoxa3P02831 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hoxa3P02831 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hoxa3P02831 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hoxa3P02831 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hoxa3P02831 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Hoxa3P02831 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hoxa3P02831 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.09■□□□□ 0.81
Hoxa3P02831 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.09■□□□□ 0.81
Hoxa3P02831 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Hoxa3P02831 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Hoxa3P02831 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Hoxa3P02831 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hoxa3P02831 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hoxa3P02831 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Hoxa3P02831 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.06■□□□□ 0.8
Hoxa3P02831 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Hoxa3P02831 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.04■□□□□ 0.8
Hoxa3P02831 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.04■□□□□ 0.8
Hoxa3P02831 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hoxa3P02831 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Hoxa3P02831 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.03■□□□□ 0.8
Hoxa3P02831 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Hoxa3P02831 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Hoxa3P02831 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Hoxa3P02831 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Hoxa3P02831 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Hoxa3P02831 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Hoxa3P02831 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.01■□□□□ 0.79
Hoxa3P02831 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hoxa3P02831 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hoxa3P02831 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hoxa3P02831 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hoxa3P02831 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Hoxa3P02831 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Hoxa3P02831 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20■□□□□ 0.79
Hoxa3P02831 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20■□□□□ 0.79
Hoxa3P02831 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.99■□□□□ 0.79
Hoxa3P02831 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Hoxa3P02831 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hoxa3P02831 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Hoxa3P02831 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hoxa3P02831 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Hoxa3P02831 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.98■□□□□ 0.79
Hoxa3P02831 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Hoxa3P02831 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hoxa3P02831 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms