Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cxcl13O55038 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cxcl13O55038 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cxcl13O55038 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cxcl13O55038 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.9■□□□□ 0.94
Cxcl13O55038 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Cxcl13O55038 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cxcl13O55038 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cxcl13O55038 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cxcl13O55038 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cxcl13O55038 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Cxcl13O55038 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cxcl13O55038 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cxcl13O55038 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cxcl13O55038 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cxcl13O55038 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cxcl13O55038 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cxcl13O55038 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.84■□□□□ 0.93
Cxcl13O55038 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cxcl13O55038 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cxcl13O55038 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.82■□□□□ 0.92
Cxcl13O55038 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Cxcl13O55038 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cxcl13O55038 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
Cxcl13O55038 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.8■□□□□ 0.92
Cxcl13O55038 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.78■□□□□ 0.92
Cxcl13O55038 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.78■□□□□ 0.92
Cxcl13O55038 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cxcl13O55038 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.77■□□□□ 0.92
Cxcl13O55038 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cxcl13O55038 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cxcl13O55038 AC153504.1-201ENSMUST00000218379 2290 ntBASIC20.77■□□□□ 0.92
Cxcl13O55038 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC20.77■□□□□ 0.91
Cxcl13O55038 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.76■□□□□ 0.91
Cxcl13O55038 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cxcl13O55038 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.76■□□□□ 0.91
Cxcl13O55038 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cxcl13O55038 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.75■□□□□ 0.91
Cxcl13O55038 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Cxcl13O55038 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.75■□□□□ 0.91
Cxcl13O55038 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cxcl13O55038 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Cxcl13O55038 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Cxcl13O55038 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.74■□□□□ 0.91
Cxcl13O55038 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cxcl13O55038 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cxcl13O55038 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Cxcl13O55038 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cxcl13O55038 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cxcl13O55038 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cxcl13O55038 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cxcl13O55038 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cxcl13O55038 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Cxcl13O55038 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cxcl13O55038 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cxcl13O55038 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cxcl13O55038 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cxcl13O55038 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cxcl13O55038 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cxcl13O55038 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cxcl13O55038 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Cxcl13O55038 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Cxcl13O55038 Gm7432-201ENSMUST00000210343 879 ntBASIC20.68■□□□□ 0.9
Cxcl13O55038 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.68■□□□□ 0.9
Cxcl13O55038 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cxcl13O55038 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.66■□□□□ 0.9
Cxcl13O55038 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cxcl13O55038 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cxcl13O55038 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cxcl13O55038 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cxcl13O55038 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.64■□□□□ 0.9
Cxcl13O55038 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cxcl13O55038 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.64■□□□□ 0.89
Cxcl13O55038 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Cxcl13O55038 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Cxcl13O55038 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.63■□□□□ 0.89
Cxcl13O55038 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cxcl13O55038 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.63■□□□□ 0.89
Cxcl13O55038 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cxcl13O55038 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Cxcl13O55038 Zxda-201ENSMUST00000117281 2621 ntBASIC20.62■□□□□ 0.89
Cxcl13O55038 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cxcl13O55038 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cxcl13O55038 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Cxcl13O55038 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cxcl13O55038 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cxcl13O55038 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cxcl13O55038 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cxcl13O55038 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cxcl13O55038 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.6■□□□□ 0.89
Cxcl13O55038 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cxcl13O55038 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Cxcl13O55038 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.59■□□□□ 0.89
Cxcl13O55038 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cxcl13O55038 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.59■□□□□ 0.89
Cxcl13O55038 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cxcl13O55038 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.59■□□□□ 0.89
Cxcl13O55038 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.58■□□□□ 0.89
Cxcl13O55038 Gm30023-201ENSMUST00000197970 889 ntBASIC20.57■□□□□ 0.88
Cxcl13O55038 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms