Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHKB-CPT1BH3BT56 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHKB-CPT1BH3BT56 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC14.94□□□□□ -0.02
CHKB-CPT1BH3BT56 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHKB-CPT1BH3BT56 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CHKB-CPT1BH3BT56 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CHKB-CPT1BH3BT56 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CHKB-CPT1BH3BT56 ABCB10P3-201ENST00000561950 2166 ntBASIC14.93□□□□□ -0.02
CHKB-CPT1BH3BT56 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHKB-CPT1BH3BT56 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CHKB-CPT1BH3BT56 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHKB-CPT1BH3BT56 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHKB-CPT1BH3BT56 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC14.92□□□□□ -0.02
CHKB-CPT1BH3BT56 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHKB-CPT1BH3BT56 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHKB-CPT1BH3BT56 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHKB-CPT1BH3BT56 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CHKB-CPT1BH3BT56 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC14.91□□□□□ -0.02
CHKB-CPT1BH3BT56 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHKB-CPT1BH3BT56 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CHKB-CPT1BH3BT56 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC14.89□□□□□ -0.03
CHKB-CPT1BH3BT56 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHKB-CPT1BH3BT56 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC14.89□□□□□ -0.03
CHKB-CPT1BH3BT56 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CHKB-CPT1BH3BT56 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
CHKB-CPT1BH3BT56 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CHKB-CPT1BH3BT56 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHKB-CPT1BH3BT56 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHKB-CPT1BH3BT56 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
CHKB-CPT1BH3BT56 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
CHKB-CPT1BH3BT56 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
CHKB-CPT1BH3BT56 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHKB-CPT1BH3BT56 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHKB-CPT1BH3BT56 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CHKB-CPT1BH3BT56 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHKB-CPT1BH3BT56 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
CHKB-CPT1BH3BT56 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CHKB-CPT1BH3BT56 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC14.86□□□□□ -0.03
CHKB-CPT1BH3BT56 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHKB-CPT1BH3BT56 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CHKB-CPT1BH3BT56 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHKB-CPT1BH3BT56 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHKB-CPT1BH3BT56 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CHKB-CPT1BH3BT56 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHKB-CPT1BH3BT56 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC14.84□□□□□ -0.03
CHKB-CPT1BH3BT56 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHKB-CPT1BH3BT56 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHKB-CPT1BH3BT56 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHKB-CPT1BH3BT56 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CHKB-CPT1BH3BT56 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
CHKB-CPT1BH3BT56 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHKB-CPT1BH3BT56 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CHKB-CPT1BH3BT56 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHKB-CPT1BH3BT56 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHKB-CPT1BH3BT56 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC14.83□□□□□ -0.04
CHKB-CPT1BH3BT56 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHKB-CPT1BH3BT56 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
CHKB-CPT1BH3BT56 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CHKB-CPT1BH3BT56 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC14.82□□□□□ -0.04
CHKB-CPT1BH3BT56 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CHKB-CPT1BH3BT56 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CHKB-CPT1BH3BT56 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CHKB-CPT1BH3BT56 SNAI3-AS1-204ENST00000567997 2048 ntBASIC14.82□□□□□ -0.04
CHKB-CPT1BH3BT56 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CHKB-CPT1BH3BT56 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
CHKB-CPT1BH3BT56 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CHKB-CPT1BH3BT56 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHKB-CPT1BH3BT56 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CHKB-CPT1BH3BT56 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHKB-CPT1BH3BT56 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHKB-CPT1BH3BT56 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC14.8□□□□□ -0.04
CHKB-CPT1BH3BT56 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHKB-CPT1BH3BT56 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CHKB-CPT1BH3BT56 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CHKB-CPT1BH3BT56 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHKB-CPT1BH3BT56 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHKB-CPT1BH3BT56 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHKB-CPT1BH3BT56 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHKB-CPT1BH3BT56 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHKB-CPT1BH3BT56 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHKB-CPT1BH3BT56 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHKB-CPT1BH3BT56 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHKB-CPT1BH3BT56 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHKB-CPT1BH3BT56 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
CHKB-CPT1BH3BT56 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHKB-CPT1BH3BT56 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHKB-CPT1BH3BT56 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CHKB-CPT1BH3BT56 ABCB10P1-201ENST00000614297 2181 ntBASIC14.76□□□□□ -0.05
CHKB-CPT1BH3BT56 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHKB-CPT1BH3BT56 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHKB-CPT1BH3BT56 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHKB-CPT1BH3BT56 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CHKB-CPT1BH3BT56 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHKB-CPT1BH3BT56 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHKB-CPT1BH3BT56 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHKB-CPT1BH3BT56 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CHKB-CPT1BH3BT56 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC14.74□□□□□ -0.05
CHKB-CPT1BH3BT56 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHKB-CPT1BH3BT56 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHKB-CPT1BH3BT56 PKD1P6-201ENST00000343738 4769 ntBASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms