Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 EYA1-201ENST00000303824 3930 ntAPPRIS ALT1 TSL 2 BASIC8.09□□□□□ -1.12
NPIPA3F8WFD2 RSU1-203ENST00000377921 3919 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
NPIPA3F8WFD2 LRRC37A11P-201ENST00000425901 3580 ntTSL 1 (best) BASIC8.09□□□□□ -1.12
NPIPA3F8WFD2 MMP3-201ENST00000299855 2016 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
NPIPA3F8WFD2 PDE6A-204ENST00000613228 5398 ntTSL 5 BASIC8.08□□□□□ -1.12
NPIPA3F8WFD2 AC018647.1-202ENST00000449644 1651 ntTSL 5 BASIC8.08□□□□□ -1.12
NPIPA3F8WFD2 FAM120B-201ENST00000476287 5155 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
NPIPA3F8WFD2 ZNF185-212ENST00000539731 4334 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
NPIPA3F8WFD2 LINC00943-203ENST00000535544 2815 ntTSL 2 BASIC8.08□□□□□ -1.12
NPIPA3F8WFD2 DNAH10-201ENST00000409039 14473 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
NPIPA3F8WFD2 SMIM7-208ENST00000487416 2776 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
NPIPA3F8WFD2 SLC12A6-203ENST00000397702 4096 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
NPIPA3F8WFD2 METTL15-204ENST00000407364 4242 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
NPIPA3F8WFD2 ANO2-202ENST00000356134 3717 ntAPPRIS P2 TSL 5 BASIC8.08□□□□□ -1.12
NPIPA3F8WFD2 GIGYF2-201ENST00000373563 5847 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
NPIPA3F8WFD2 MED7-201ENST00000286317 2402 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
NPIPA3F8WFD2 KCNMA1-AS1-206ENST00000600782 1755 ntTSL 5 BASIC8.08□□□□□ -1.12
NPIPA3F8WFD2 AC015813.3-201ENST00000584805 6113 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
NPIPA3F8WFD2 THAP9-AS1-204ENST00000504792 2577 ntTSL 2 BASIC8.08□□□□□ -1.12
NPIPA3F8WFD2 Metazoa_SRP.5-201ENST00000356560 281 ntBASIC8.08□□□□□ -1.12
NPIPA3F8WFD2 IL36G-202ENST00000376489 989 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
NPIPA3F8WFD2 TRBV10-1-201ENST00000390364 412 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
NPIPA3F8WFD2 BRCC3-206ENST00000399042 954 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
NPIPA3F8WFD2 AL035467.1-201ENST00000403583 686 ntBASIC8.08□□□□□ -1.12
NPIPA3F8WFD2 AL135905.1-201ENST00000416120 801 ntBASIC8.08□□□□□ -1.12
NPIPA3F8WFD2 AL109659.1-201ENST00000431986 651 ntTSL 3 BASIC8.08□□□□□ -1.12
NPIPA3F8WFD2 ARAFP3-201ENST00000454154 490 ntBASIC8.08□□□□□ -1.12
NPIPA3F8WFD2 NDUFB11P1-201ENST00000455818 465 ntBASIC8.08□□□□□ -1.12
NPIPA3F8WFD2 AF186996.8-201ENST00000463158 907 ntBASIC8.08□□□□□ -1.12
NPIPA3F8WFD2 OR7E121P-201ENST00000494533 1022 ntBASIC8.08□□□□□ -1.12
NPIPA3F8WFD2 CFL1P5-201ENST00000508046 502 ntBASIC8.08□□□□□ -1.12
NPIPA3F8WFD2 AP003063.1-201ENST00000528496 855 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
NPIPA3F8WFD2 MTND6P25-201ENST00000528711 516 ntBASIC8.08□□□□□ -1.12
NPIPA3F8WFD2 NBPF5P-202ENST00000545941 1032 ntBASIC8.08□□□□□ -1.12
NPIPA3F8WFD2 AC090115.1-201ENST00000548257 562 ntTSL 4 BASIC8.08□□□□□ -1.12
NPIPA3F8WFD2 PLA2G1B-203ENST00000549767 562 ntTSL 2 BASIC8.08□□□□□ -1.12
NPIPA3F8WFD2 AC002375.1-201ENST00000551161 581 ntTSL 3 BASIC8.08□□□□□ -1.12
NPIPA3F8WFD2 LINGO1-AS1-202ENST00000558887 1124 ntTSL 2 BASIC8.08□□□□□ -1.12
NPIPA3F8WFD2 INTS6-AS1-204ENST00000593709 648 ntTSL 5 BASIC8.08□□□□□ -1.12
NPIPA3F8WFD2 AC010978.1-206ENST00000598281 828 ntTSL 5 BASIC8.08□□□□□ -1.12
NPIPA3F8WFD2 C22orf24-203ENST00000623735 1247 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
NPIPA3F8WFD2 CU639417.5-201ENST00000623983 476 ntTSL 3 BASIC8.08□□□□□ -1.12
NPIPA3F8WFD2 AC087645.3-201ENST00000624708 587 ntBASIC8.08□□□□□ -1.12
NPIPA3F8WFD2 AL139220.2-211ENST00000628234 754 ntTSL 5 BASIC8.08□□□□□ -1.12
NPIPA3F8WFD2 BRCC3-210ENST00000630295 954 ntTSL 5 BASIC8.08□□□□□ -1.12
NPIPA3F8WFD2 AL445648.1-201ENST00000641176 886 ntBASIC8.08□□□□□ -1.12
NPIPA3F8WFD2 TNRC6C-AS1-201ENST00000589217 3192 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
NPIPA3F8WFD2 ZNF197-205ENST00000396058 4299 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
NPIPA3F8WFD2 TCF7L2-204ENST00000352065 1553 ntAPPRIS ALT1 TSL 1 (best) BASIC8.08□□□□□ -1.12
NPIPA3F8WFD2 TP63-212ENST00000456148 1749 ntAPPRIS ALT1 TSL 5 BASIC8.08□□□□□ -1.12
NPIPA3F8WFD2 CHD2-212ENST00000627622 1740 ntTSL 2 BASIC8.08□□□□□ -1.12
NPIPA3F8WFD2 SCMH1-204ENST00000361705 3115 ntTSL 5 BASIC8.08□□□□□ -1.12
NPIPA3F8WFD2 LIMCH1-215ENST00000512632 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
NPIPA3F8WFD2 MCM8-203ENST00000378886 3835 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
NPIPA3F8WFD2 DHRS9-206ENST00000436483 1817 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
NPIPA3F8WFD2 ZNF320-201ENST00000391781 6074 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
NPIPA3F8WFD2 TNFSF11-204ENST00000405262 2135 ntTSL 5 BASIC8.08□□□□□ -1.12
NPIPA3F8WFD2 FO393415.1-201ENST00000314481 2255 ntTSL 2 BASIC8.08□□□□□ -1.12
NPIPA3F8WFD2 SLC28A2-201ENST00000347644 4374 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
NPIPA3F8WFD2 KAT6A-208ENST00000485568 3592 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
NPIPA3F8WFD2 CD300LD-201ENST00000375352 1303 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
NPIPA3F8WFD2 FCGR3B-204ENST00000531221 1339 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
NPIPA3F8WFD2 NLRP4-201ENST00000301295 3670 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
NPIPA3F8WFD2 SRL-201ENST00000399609 4214 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
NPIPA3F8WFD2 CACNB4-250ENST00000637418 2015 ntTSL 5 BASIC8.07□□□□□ -1.12
NPIPA3F8WFD2 BRPF1-206ENST00000457855 4308 ntAPPRIS P3 TSL 2 BASIC8.07□□□□□ -1.12
NPIPA3F8WFD2 APOL2-202ENST00000358502 2551 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
NPIPA3F8WFD2 COMMD3-BMI1-205ENST00000602390 1419 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
NPIPA3F8WFD2 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
NPIPA3F8WFD2 TAC1-202ENST00000346867 1011 ntAPPRIS ALT1 TSL 3 BASIC8.07□□□□□ -1.12
NPIPA3F8WFD2 MAPK6PS6-201ENST00000420752 1053 ntBASIC8.07□□□□□ -1.12
NPIPA3F8WFD2 AP001062.2-201ENST00000426029 127 ntTSL 3 BASIC8.07□□□□□ -1.12
NPIPA3F8WFD2 PAICSP3-201ENST00000428007 1168 ntBASIC8.07□□□□□ -1.12
NPIPA3F8WFD2 SPAG11A-205ENST00000434307 777 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
NPIPA3F8WFD2 BSNDP4-201ENST00000436076 388 ntBASIC8.07□□□□□ -1.12
NPIPA3F8WFD2 PCBP1-AS1-233ENST00000442326 668 ntTSL 3 BASIC8.07□□□□□ -1.12
NPIPA3F8WFD2 LDHAP3-201ENST00000448312 1008 ntBASIC8.07□□□□□ -1.12
NPIPA3F8WFD2 AC104843.1-201ENST00000451203 319 ntBASIC8.07□□□□□ -1.12
NPIPA3F8WFD2 AC108114.1-201ENST00000477321 437 ntBASIC8.07□□□□□ -1.12
NPIPA3F8WFD2 OR7E28P-201ENST00000505191 975 ntBASIC8.07□□□□□ -1.12
NPIPA3F8WFD2 AC084121.2-201ENST00000528788 264 ntBASIC8.07□□□□□ -1.12
NPIPA3F8WFD2 AC022880.2-201ENST00000532664 270 ntBASIC8.07□□□□□ -1.12
NPIPA3F8WFD2 FLVCR2-202ENST00000539311 1221 ntTSL 2 BASIC8.07□□□□□ -1.12
NPIPA3F8WFD2 AC126323.1-201ENST00000561706 611 ntTSL 3 BASIC8.07□□□□□ -1.12
NPIPA3F8WFD2 AC137527.1-201ENST00000565839 1261 ntBASIC8.07□□□□□ -1.12
NPIPA3F8WFD2 AC099518.5-201ENST00000567236 1137 ntTSL 3 BASIC8.07□□□□□ -1.12
NPIPA3F8WFD2 AC080037.1-201ENST00000584975 889 ntTSL 3 BASIC8.07□□□□□ -1.12
NPIPA3F8WFD2 FAM95B1-209ENST00000590863 789 ntTSL 2 BASIC8.07□□□□□ -1.12
NPIPA3F8WFD2 AC011477.1-201ENST00000591884 544 ntTSL 5 BASIC8.07□□□□□ -1.12
NPIPA3F8WFD2 LINC00629-202ENST00000592070 844 ntTSL 3 BASIC8.07□□□□□ -1.12
NPIPA3F8WFD2 AL161725.1-211ENST00000592805 889 ntTSL 5 BASIC8.07□□□□□ -1.12
NPIPA3F8WFD2 AL669942.1-201ENST00000611307 713 ntTSL 5 BASIC8.07□□□□□ -1.12
NPIPA3F8WFD2 BSNDP3-201ENST00000617487 364 ntBASIC8.07□□□□□ -1.12
NPIPA3F8WFD2 RBBP4P3-201ENST00000619705 1283 ntBASIC8.07□□□□□ -1.12
NPIPA3F8WFD2 AC106733.1-201ENST00000624476 1038 ntBASIC8.07□□□□□ -1.12
NPIPA3F8WFD2 MIR3160-2-201ENST00000637870 81 ntBASIC8.07□□□□□ -1.12
NPIPA3F8WFD2 HLA-B-257ENST00000640094 147 ntBASIC8.07□□□□□ -1.12
NPIPA3F8WFD2 PTPRD-AS1-201ENST00000430766 1959 ntTSL 2 BASIC8.07□□□□□ -1.12
NPIPA3F8WFD2 AC010487.3-201ENST00000634278 1966 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
NPIPA3F8WFD2 AC007920.2-201ENST00000636210 1973 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms