Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 RN7SKP10-201ENST00000364291 325 ntBASIC8.9□□□□□ -0.98
NCDNQ9UBB6 RNA5SP427-201ENST00000365323 119 ntBASIC8.9□□□□□ -0.98
NCDNQ9UBB6 CRYGS-202ENST00000392499 1132 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.98
NCDNQ9UBB6 RPL17P10-201ENST00000416091 555 ntBASIC8.9□□□□□ -0.98
NCDNQ9UBB6 CHCHD2P5-201ENST00000421414 400 ntBASIC8.9□□□□□ -0.98
NCDNQ9UBB6 AC110015.1-201ENST00000423367 440 ntTSL 3 BASIC8.9□□□□□ -0.98
NCDNQ9UBB6 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC8.9□□□□□ -0.98
NCDNQ9UBB6 ACTBP12-201ENST00000435871 418 ntBASIC8.9□□□□□ -0.98
NCDNQ9UBB6 PHKG1P1-201ENST00000442924 614 ntBASIC8.9□□□□□ -0.98
NCDNQ9UBB6 LINC01888-202ENST00000457602 574 ntTSL 2 BASIC8.9□□□□□ -0.98
NCDNQ9UBB6 RN7SL587P-201ENST00000459853 281 ntBASIC8.9□□□□□ -0.98
NCDNQ9UBB6 IGKV1-16-201ENST00000479981 378 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
NCDNQ9UBB6 LINC02016-201ENST00000488425 927 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
NCDNQ9UBB6 RN7SL314P-201ENST00000490735 292 ntBASIC8.9□□□□□ -0.98
NCDNQ9UBB6 AL449212.1-201ENST00000499853 517 ntBASIC8.9□□□□□ -0.98
NCDNQ9UBB6 TRIM36-IT1-201ENST00000503723 881 ntBASIC8.9□□□□□ -0.98
NCDNQ9UBB6 SNRPCP8-201ENST00000514820 211 ntBASIC8.9□□□□□ -0.98
NCDNQ9UBB6 AC114781.2-201ENST00000515670 394 ntTSL 3 BASIC8.9□□□□□ -0.98
NCDNQ9UBB6 NOVA1-AS1-201ENST00000547786 818 ntTSL 3 BASIC8.9□□□□□ -0.98
NCDNQ9UBB6 AL023284.4-201ENST00000564248 374 ntBASIC8.9□□□□□ -0.98
NCDNQ9UBB6 SPINT1-AS1-204ENST00000568419 629 ntTSL 3 BASIC8.9□□□□□ -0.98
NCDNQ9UBB6 AC004477.2-201ENST00000583349 192 ntTSL 3 BASIC8.9□□□□□ -0.98
NCDNQ9UBB6 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC8.9□□□□□ -0.98
NCDNQ9UBB6 AC090953.1-201ENST00000604305 1092 ntBASIC8.9□□□□□ -0.98
NCDNQ9UBB6 SPRY4-IT1-201ENST00000630558 703 ntBASIC8.9□□□□□ -0.98
NCDNQ9UBB6 AC079602.4-201ENST00000637836 532 ntBASIC8.9□□□□□ -0.98
NCDNQ9UBB6 PDZPH1P-201ENST00000412514 1783 ntBASIC8.9□□□□□ -0.98
NCDNQ9UBB6 MDH1B-204ENST00000449792 1757 ntTSL 5 BASIC8.9□□□□□ -0.98
NCDNQ9UBB6 MDH1B-205ENST00000454776 1795 ntAPPRIS ALT2 TSL 2 BASIC8.9□□□□□ -0.98
NCDNQ9UBB6 TPD52L3-202ENST00000344545 2296 ntAPPRIS P4 BASIC8.9□□□□□ -0.98
NCDNQ9UBB6 LIN52-205ENST00000555028 2776 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
NCDNQ9UBB6 MAPK10-368ENST00000641911 2238 ntAPPRIS P2 BASIC8.9□□□□□ -0.98
NCDNQ9UBB6 HENMT1-201ENST00000370031 1717 ntTSL 5 BASIC8.9□□□□□ -0.98
NCDNQ9UBB6 SLC25A14-215ENST00000612248 1734 ntTSL 5 BASIC8.9□□□□□ -0.98
NCDNQ9UBB6 PRPF38B-203ENST00000370025 3693 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
NCDNQ9UBB6 AC007038.1-201ENST00000452057 2199 ntTSL 2 BASIC8.9□□□□□ -0.98
NCDNQ9UBB6 ARMC4-201ENST00000305242 3572 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
NCDNQ9UBB6 CAMK2D-203ENST00000379773 1642 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.99
NCDNQ9UBB6 STXBP5L-204ENST00000471454 3813 ntAPPRIS ALT1 TSL 2 BASIC8.9□□□□□ -0.99
NCDNQ9UBB6 SPDYE9P-202ENST00000571071 2024 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
NCDNQ9UBB6 SPDYE11-203ENST00000573748 2024 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
NCDNQ9UBB6 SPDYE10P-201ENST00000576332 2021 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
NCDNQ9UBB6 JADE1-203ENST00000452328 5544 ntAPPRIS ALT2 TSL 2 BASIC8.9□□□□□ -0.99
NCDNQ9UBB6 AL365217.1-201ENST00000398578 2436 ntBASIC8.9□□□□□ -0.99
NCDNQ9UBB6 WDR47-205ENST00000400794 4134 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
NCDNQ9UBB6 SYNE1-230ENST00000495090 1907 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
NCDNQ9UBB6 TUBB1-201ENST00000217133 3496 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
NCDNQ9UBB6 NAV2-213ENST00000533917 5084 ntTSL 2 BASIC8.89□□□□□ -0.99
NCDNQ9UBB6 HEATR9-204ENST00000603870 1829 ntAPPRIS ALT2 TSL 2 BASIC8.89□□□□□ -0.99
NCDNQ9UBB6 ZNF432-201ENST00000221315 2577 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
NCDNQ9UBB6 IL5RA-210ENST00000456302 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
NCDNQ9UBB6 UHRF1BP1-201ENST00000192788 9570 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
NCDNQ9UBB6 OR9Q1-202ENST00000612174 2134 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
NCDNQ9UBB6 DDAH1-202ENST00000426972 4017 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
NCDNQ9UBB6 AC104825.2-201ENST00000505448 3249 ntBASIC8.89□□□□□ -0.99
NCDNQ9UBB6 KRTAP9-6-201ENST00000391355 1303 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
NCDNQ9UBB6 AC092656.1-201ENST00000503243 2097 ntTSL 2 BASIC8.89□□□□□ -0.99
NCDNQ9UBB6 ATXN1-202ENST00000436367 10587 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
NCDNQ9UBB6 L3MBTL3-202ENST00000368136 4235 ntAPPRIS P4 TSL 5 BASIC8.89□□□□□ -0.99
NCDNQ9UBB6 ZNF259P1-202ENST00000572422 4912 ntBASIC8.89□□□□□ -0.99
NCDNQ9UBB6 OR3A3-201ENST00000291231 966 ntBASIC8.89□□□□□ -0.99
NCDNQ9UBB6 ZNF626-201ENST00000291750 1123 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
NCDNQ9UBB6 RNA5SP263-201ENST00000363376 128 ntBASIC8.89□□□□□ -0.99
NCDNQ9UBB6 MRPL47-202ENST00000392659 673 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
NCDNQ9UBB6 SET-205ENST00000409104 962 ntTSL 5 BASIC8.89□□□□□ -0.99
NCDNQ9UBB6 EEF1A1P27-201ENST00000429983 1135 ntBASIC8.89□□□□□ -0.99
NCDNQ9UBB6 DDX3X-202ENST00000441189 1051 ntTSL 2 BASIC8.89□□□□□ -0.99
NCDNQ9UBB6 SLC39A12-AS1-202ENST00000445287 1006 ntTSL 3 BASIC8.89□□□□□ -0.99
NCDNQ9UBB6 AC114755.1-201ENST00000453101 868 ntBASIC8.89□□□□□ -0.99
NCDNQ9UBB6 AC004448.4-203ENST00000456537 441 ntTSL 3 BASIC8.89□□□□□ -0.99
NCDNQ9UBB6 LINC01883-201ENST00000457385 380 ntTSL 2 BASIC8.89□□□□□ -0.99
NCDNQ9UBB6 BLNK-209ENST00000495266 440 ntTSL 5 BASIC8.89□□□□□ -0.99
NCDNQ9UBB6 PDCD10-218ENST00000497056 1276 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
NCDNQ9UBB6 BAALC-AS1-202ENST00000500902 993 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
NCDNQ9UBB6 AC233724.16-201ENST00000510838 1201 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
NCDNQ9UBB6 AC026616.1-201ENST00000523157 525 ntBASIC8.89□□□□□ -0.99
NCDNQ9UBB6 SSR2-215ENST00000529008 849 ntTSL 5 BASIC8.89□□□□□ -0.99
NCDNQ9UBB6 LINC02295-201ENST00000557072 374 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
NCDNQ9UBB6 OR3A3-202ENST00000574571 966 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
NCDNQ9UBB6 AC090950.1-201ENST00000604625 830 ntBASIC8.89□□□□□ -0.99
NCDNQ9UBB6 GNAS-AS1_2.1-201ENST00000613404 114 ntBASIC8.89□□□□□ -0.99
NCDNQ9UBB6 AC099654.4-201ENST00000614168 1059 ntBASIC8.89□□□□□ -0.99
NCDNQ9UBB6 AC005796.1-201ENST00000623214 433 ntBASIC8.89□□□□□ -0.99
NCDNQ9UBB6 CR381653.1-205ENST00000623409 580 ntTSL 5 BASIC8.89□□□□□ -0.99
NCDNQ9UBB6 AL353608.4-201ENST00000624487 1188 ntBASIC8.89□□□□□ -0.99
NCDNQ9UBB6 LAMTOR5-AS1-246ENST00000630298 858 ntTSL 5 BASIC8.89□□□□□ -0.99
NCDNQ9UBB6 RAD54L2-201ENST00000409535 9776 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
NCDNQ9UBB6 FO393415.1-201ENST00000314481 2255 ntTSL 2 BASIC8.89□□□□□ -0.99
NCDNQ9UBB6 SSBP3-AS1-201ENST00000361350 2624 ntBASIC8.89□□□□□ -0.99
NCDNQ9UBB6 ASH2LP2-201ENST00000453999 1561 ntBASIC8.89□□□□□ -0.99
NCDNQ9UBB6 NUDT13-207ENST00000544879 2258 ntTSL 2 BASIC8.89□□□□□ -0.99
NCDNQ9UBB6 CAB39L-212ENST00000610540 3692 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
NCDNQ9UBB6 TCF4-245ENST00000570177 1872 ntTSL 2 BASIC8.89□□□□□ -0.99
NCDNQ9UBB6 HOXA1-201ENST00000343060 2517 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
NCDNQ9UBB6 RCAN1-210ENST00000487990 2520 ntTSL 2 BASIC8.89□□□□□ -0.99
NCDNQ9UBB6 AC098614.1-202ENST00000634895 1830 ntBASIC8.89□□□□□ -0.99
NCDNQ9UBB6 AC105233.5-202ENST00000642083 4132 ntBASIC8.89□□□□□ -0.99
NCDNQ9UBB6 MSL3-202ENST00000337339 3446 ntTSL 2 BASIC8.89□□□□□ -0.99
NCDNQ9UBB6 AP000552.1-202ENST00000436681 3714 ntTSL 5 BASIC8.89□□□□□ -0.99
NCDNQ9UBB6 SGK1-203ENST00000367857 2414 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms