Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 COL6A6-201ENST00000358511 9581 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
SLC1A1P43005 LINC01886-202ENST00000443205 1539 ntTSL 3 BASIC9.26□□□□□ -0.93
SLC1A1P43005 NOL4-201ENST00000261592 3957 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
SLC1A1P43005 LINC01258-201ENST00000512517 2059 ntTSL 2 BASIC9.25□□□□□ -0.93
SLC1A1P43005 ZNF92-202ENST00000357512 3124 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
SLC1A1P43005 PPFIA2-220ENST00000550584 5405 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
SLC1A1P43005 RNA5-8SP2-201ENST00000363564 152 ntBASIC9.25□□□□□ -0.93
SLC1A1P43005 C2orf76-204ENST00000409877 950 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
SLC1A1P43005 SCG5-202ENST00000413748 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC9.25□□□□□ -0.93
SLC1A1P43005 AL157895.1-203ENST00000423551 708 ntTSL 5 BASIC9.25□□□□□ -0.93
SLC1A1P43005 DUXAP7-201ENST00000431038 689 ntBASIC9.25□□□□□ -0.93
SLC1A1P43005 AL355483.1-201ENST00000450469 237 ntTSL 3 BASIC9.25□□□□□ -0.93
SLC1A1P43005 LINC01231-201ENST00000452746 886 ntTSL 3 BASIC9.25□□□□□ -0.93
SLC1A1P43005 RN7SL749P-201ENST00000460421 290 ntBASIC9.25□□□□□ -0.93
SLC1A1P43005 AC006534.1-201ENST00000469329 541 ntBASIC9.25□□□□□ -0.93
SLC1A1P43005 AC010307.2-202ENST00000502776 570 ntTSL 4 BASIC9.25□□□□□ -0.93
SLC1A1P43005 AC017013.1-201ENST00000506459 799 ntBASIC9.25□□□□□ -0.93
SLC1A1P43005 LINC01259-201ENST00000507056 757 ntTSL 3 BASIC9.25□□□□□ -0.93
SLC1A1P43005 IGLV3-13-201ENST00000518475 223 ntBASIC9.25□□□□□ -0.93
SLC1A1P43005 TATDN3-207ENST00000526641 1073 ntTSL 2 BASIC9.25□□□□□ -0.93
SLC1A1P43005 BRWD1P2-201ENST00000546823 340 ntBASIC9.25□□□□□ -0.93
SLC1A1P43005 TROAP-209ENST00000549275 348 ntAPPRIS ALT2 TSL 3 BASIC9.25□□□□□ -0.93
SLC1A1P43005 MEG8-208ENST00000553465 1176 ntTSL 5 BASIC9.25□□□□□ -0.93
SLC1A1P43005 AP001496.2-202ENST00000579933 977 ntTSL 5 BASIC9.25□□□□□ -0.93
SLC1A1P43005 snoZ6.4-201ENST00000581669 55 ntBASIC9.25□□□□□ -0.93
SLC1A1P43005 AL138689.1-201ENST00000614612 668 ntBASIC9.25□□□□□ -0.93
SLC1A1P43005 AC001226.1-201ENST00000620512 539 ntBASIC9.25□□□□□ -0.93
SLC1A1P43005 LINC01320-214ENST00000627935 916 ntTSL 5 BASIC9.25□□□□□ -0.93
SLC1A1P43005 CYB5B-202ENST00000512062 4358 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
SLC1A1P43005 AC048380.2-201ENST00000624725 3548 ntBASIC9.25□□□□□ -0.93
SLC1A1P43005 CHRDL1-203ENST00000394797 2413 ntAPPRIS P3 TSL 5 BASIC9.25□□□□□ -0.93
SLC1A1P43005 AC009053.1-202ENST00000563377 2051 ntBASIC9.25□□□□□ -0.93
SLC1A1P43005 LOXHD1-212ENST00000582408 3755 ntTSL 2 BASIC9.25□□□□□ -0.93
SLC1A1P43005 CEACAM21-201ENST00000187608 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
SLC1A1P43005 LIG4-204ENST00000611712 4180 ntAPPRIS P1 TSL 4 BASIC9.25□□□□□ -0.93
SLC1A1P43005 AC011294.1-202ENST00000451905 1947 ntTSL 2 BASIC9.25□□□□□ -0.93
SLC1A1P43005 GPR182-201ENST00000300098 3451 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
SLC1A1P43005 FGFR2-206ENST00000358487 4255 ntAPPRIS ALT1 TSL 1 (best) BASIC9.25□□□□□ -0.93
SLC1A1P43005 CPEB1-209ENST00000614918 4882 ntTSL 5 BASIC9.25□□□□□ -0.93
SLC1A1P43005 AKAP2-201ENST00000259318 3101 ntAPPRIS ALT2 TSL 2 BASIC9.25□□□□□ -0.93
SLC1A1P43005 PAPD4-204ENST00000453514 3523 ntAPPRIS P3 TSL 5 BASIC9.25□□□□□ -0.93
SLC1A1P43005 TPH2-201ENST00000333850 2360 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SLC1A1P43005 KLF5-205ENST00000539231 2951 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
SLC1A1P43005 ZNF791-201ENST00000343325 4554 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SLC1A1P43005 GIGYF2-201ENST00000373563 5847 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
SLC1A1P43005 RASA2-201ENST00000286364 5614 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
SLC1A1P43005 AL590004.4-201ENST00000566733 7060 ntBASIC9.24□□□□□ -0.93
SLC1A1P43005 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SLC1A1P43005 ZNF383-208ENST00000590503 1673 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
SLC1A1P43005 AZI2-202ENST00000334100 943 ntTSL 3 BASIC9.24□□□□□ -0.93
SLC1A1P43005 NDUFA3-202ENST00000391762 435 ntTSL 5 BASIC9.24□□□□□ -0.93
SLC1A1P43005 Metazoa_SRP.7-201ENST00000392674 281 ntBASIC9.24□□□□□ -0.93
SLC1A1P43005 GABRA1-202ENST00000393943 4686 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SLC1A1P43005 OR2A12-201ENST00000408949 1046 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
SLC1A1P43005 EIF3KP2-201ENST00000415266 626 ntBASIC9.24□□□□□ -0.93
SLC1A1P43005 AL355863.1-201ENST00000424331 293 ntBASIC9.24□□□□□ -0.93
SLC1A1P43005 SPAG11A-205ENST00000434307 777 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
SLC1A1P43005 SLC8A1-AS1-206ENST00000439606 565 ntTSL 4 BASIC9.24□□□□□ -0.93
SLC1A1P43005 AC073089.1-201ENST00000457546 214 ntBASIC9.24□□□□□ -0.93
SLC1A1P43005 AC107302.1-201ENST00000467059 1032 ntBASIC9.24□□□□□ -0.93
SLC1A1P43005 RPL29P11-201ENST00000494408 492 ntBASIC9.24□□□□□ -0.93
SLC1A1P43005 OR7E121P-201ENST00000494533 1022 ntBASIC9.24□□□□□ -0.93
SLC1A1P43005 BTNL8-207ENST00000511704 1260 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
SLC1A1P43005 AC021546.1-201ENST00000518927 1031 ntTSL 3 BASIC9.24□□□□□ -0.93
SLC1A1P43005 AL139023.1-201ENST00000548280 508 ntTSL 4 BASIC9.24□□□□□ -0.93
SLC1A1P43005 AL137779.1-201ENST00000556205 599 ntTSL 3 BASIC9.24□□□□□ -0.93
SLC1A1P43005 CYP1A1-205ENST00000564596 988 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
SLC1A1P43005 LINC01764-202ENST00000589310 441 ntTSL 3 BASIC9.24□□□□□ -0.93
SLC1A1P43005 FAM95B1-209ENST00000590863 789 ntTSL 2 BASIC9.24□□□□□ -0.93
SLC1A1P43005 TBX18-AS1-208ENST00000591225 762 ntTSL 5 BASIC9.24□□□□□ -0.93
SLC1A1P43005 AC010320.3-201ENST00000594865 447 ntTSL 3 BASIC9.24□□□□□ -0.93
SLC1A1P43005 AC007785.3-201ENST00000595955 544 ntTSL 5 BASIC9.24□□□□□ -0.93
SLC1A1P43005 AC007450.2-201ENST00000614160 290 ntBASIC9.24□□□□□ -0.93
SLC1A1P43005 AL022329.3-201ENST00000624255 352 ntBASIC9.24□□□□□ -0.93
SLC1A1P43005 IQGAP1-214ENST00000560738 3602 ntTSL 5 BASIC9.24□□□□□ -0.93
SLC1A1P43005 AC128688.2-201ENST00000563632 1937 ntBASIC9.24□□□□□ -0.93
SLC1A1P43005 AL033381.1-201ENST00000314040 3435 ntTSL 2 BASIC9.24□□□□□ -0.93
SLC1A1P43005 LYZ-201ENST00000261267 1530 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SLC1A1P43005 AL158206.1-201ENST00000563205 1965 ntBASIC9.24□□□□□ -0.93
SLC1A1P43005 SCYL3-202ENST00000367771 6364 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
SLC1A1P43005 PPARG-209ENST00000397026 2029 ntTSL 5 BASIC9.24□□□□□ -0.93
SLC1A1P43005 EFCAB10-205ENST00000486180 1550 ntAPPRIS P5 TSL 1 (best) BASIC9.24□□□□□ -0.93
SLC1A1P43005 NUDT13-201ENST00000349051 1835 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
SLC1A1P43005 UTP15-202ENST00000508491 1828 ntTSL 2 BASIC9.24□□□□□ -0.93
SLC1A1P43005 MCF2L2-203ENST00000447025 2394 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SLC1A1P43005 ITK-201ENST00000422843 4528 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SLC1A1P43005 TBC1D5-219ENST00000446818 3124 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SLC1A1P43005 KCNMB3-205ENST00000485523 7246 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SLC1A1P43005 RBBP9-201ENST00000337227 3861 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SLC1A1P43005 HNRNPK-205ENST00000376281 2928 ntAPPRIS P4 TSL 1 (best) BASIC9.23□□□□□ -0.93
SLC1A1P43005 SCUBE3-201ENST00000274938 7356 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SLC1A1P43005 TMOD2-202ENST00000435126 1490 ntTSL 2 BASIC9.23□□□□□ -0.93
SLC1A1P43005 HEATR6-203ENST00000585976 3288 ntTSL 5 BASIC9.23□□□□□ -0.93
SLC1A1P43005 HEATR6-212ENST00000613428 3287 ntTSL 5 BASIC9.23□□□□□ -0.93
SLC1A1P43005 ZNF565-201ENST00000304116 2023 ntAPPRIS P2 TSL 2 BASIC9.23□□□□□ -0.93
SLC1A1P43005 TRNT1-203ENST00000339437 976 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SLC1A1P43005 AC108059.1-201ENST00000411629 725 ntBASIC9.23□□□□□ -0.93
SLC1A1P43005 AC244157.1-201ENST00000415642 163 ntBASIC9.23□□□□□ -0.93
SLC1A1P43005 AL441943.3-201ENST00000418524 587 ntTSL 5 BASIC9.23□□□□□ -0.93
SLC1A1P43005 AL365356.3-201ENST00000427341 657 ntTSL 3 BASIC9.23□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms