Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 ESRRG-207ENST00000366940 5314 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
SYCE2Q6PIF2 GAPVD1-219ENST00000495955 5309 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
SYCE2Q6PIF2 MIR1184-2-201ENST00000408263 99 ntBASIC9.4□□□□□ -0.9
SYCE2Q6PIF2 MIR1184-1-201ENST00000408606 99 ntBASIC9.4□□□□□ -0.9
SYCE2Q6PIF2 MIR1184-3-201ENST00000408676 99 ntBASIC9.4□□□□□ -0.9
SYCE2Q6PIF2 GEMIN6-203ENST00000409566 834 ntTSL 2 BASIC9.4□□□□□ -0.9
SYCE2Q6PIF2 AC073367.1-201ENST00000421480 697 ntTSL 2 BASIC9.4□□□□□ -0.9
SYCE2Q6PIF2 ARHGEF7-IT1-201ENST00000423329 804 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
SYCE2Q6PIF2 AC034228.1-201ENST00000424244 923 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
SYCE2Q6PIF2 AC068137.1-201ENST00000429272 584 ntBASIC9.4□□□□□ -0.9
SYCE2Q6PIF2 AP000474.1-201ENST00000441465 680 ntTSL 3 BASIC9.4□□□□□ -0.9
SYCE2Q6PIF2 AL451081.2-201ENST00000448115 933 ntBASIC9.4□□□□□ -0.9
SYCE2Q6PIF2 AL392003.2-201ENST00000451015 679 ntBASIC9.4□□□□□ -0.9
SYCE2Q6PIF2 MYB-AS1-201ENST00000455534 449 ntTSL 2 BASIC9.4□□□□□ -0.9
SYCE2Q6PIF2 IGKV1-16-201ENST00000479981 378 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
SYCE2Q6PIF2 AF131215.1-201ENST00000488887 520 ntBASIC9.4□□□□□ -0.9
SYCE2Q6PIF2 AC105345.2-201ENST00000515186 664 ntTSL 3 BASIC9.4□□□□□ -0.9
SYCE2Q6PIF2 AC103770.1-201ENST00000517884 833 ntTSL 3 BASIC9.4□□□□□ -0.9
SYCE2Q6PIF2 AC003991.2-201ENST00000520993 576 ntTSL 4 BASIC9.4□□□□□ -0.9
SYCE2Q6PIF2 AP000820.1-201ENST00000545912 506 ntTSL 3 BASIC9.4□□□□□ -0.9
SYCE2Q6PIF2 EIF4EBP1P1-201ENST00000557776 341 ntBASIC9.4□□□□□ -0.9
SYCE2Q6PIF2 AC099518.5-201ENST00000567236 1137 ntTSL 3 BASIC9.4□□□□□ -0.9
SYCE2Q6PIF2 AC233702.4-201ENST00000581610 304 ntBASIC9.4□□□□□ -0.9
SYCE2Q6PIF2 AC005495.1-201ENST00000586611 1211 ntBASIC9.4□□□□□ -0.9
SYCE2Q6PIF2 AC090213.1-201ENST00000586841 546 ntTSL 4 BASIC9.4□□□□□ -0.9
SYCE2Q6PIF2 LINC00629-202ENST00000592070 844 ntTSL 3 BASIC9.4□□□□□ -0.9
SYCE2Q6PIF2 AL136304.1-201ENST00000607790 509 ntBASIC9.4□□□□□ -0.9
SYCE2Q6PIF2 Metazoa_SRP.162-201ENST00000613066 277 ntBASIC9.4□□□□□ -0.9
SYCE2Q6PIF2 RBM22P4-201ENST00000613117 1240 ntBASIC9.4□□□□□ -0.9
SYCE2Q6PIF2 BX255923.1-201ENST00000613309 681 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
SYCE2Q6PIF2 CBR3-AS1-213ENST00000623647 815 ntTSL 5 BASIC9.4□□□□□ -0.9
SYCE2Q6PIF2 ZNF774-202ENST00000379090 5613 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
SYCE2Q6PIF2 ZMYND8-220ENST00000617418 3411 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
SYCE2Q6PIF2 LUC7L3-208ENST00000505658 7040 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
SYCE2Q6PIF2 TRIM55-201ENST00000276573 1960 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
SYCE2Q6PIF2 PREPL-202ENST00000378511 2315 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
SYCE2Q6PIF2 KIAA0930-202ENST00000336156 8119 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
SYCE2Q6PIF2 NHLRC3-203ENST00000470258 3298 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
SYCE2Q6PIF2 FAM13A-220ENST00000513837 2590 ntTSL 2 BASIC9.4□□□□□ -0.9
SYCE2Q6PIF2 AP002957.1-203ENST00000526091 1897 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
SYCE2Q6PIF2 PCDH19-203ENST00000420881 7936 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
SYCE2Q6PIF2 AL645922.1-201ENST00000456570 3874 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.91
SYCE2Q6PIF2 ALDH1A2-217ENST00000559517 1468 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
SYCE2Q6PIF2 ZNF37A-201ENST00000351773 7027 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
SYCE2Q6PIF2 ZSWIM1-202ENST00000372523 2769 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.91
SYCE2Q6PIF2 IL16-201ENST00000302987 3999 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 TYW1-201ENST00000359626 3348 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 TRIM49D2-201ENST00000526396 1411 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 SEPT4-216ENST00000580844 1396 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 CRIPT-201ENST00000238892 1953 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 GFM2-202ENST00000345239 2856 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 ZNF146-202ENST00000456324 3780 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 AL662907.2-201ENST00000624339 3448 ntBASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 MCM3AP-AS1-201ENST00000414659 2539 ntTSL 2 BASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 PTRH2-202ENST00000409433 2246 ntAPPRIS ALT1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 TRIM51-202ENST00000449290 1629 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 AL513523.1-201ENST00000417868 1309 ntBASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 DZANK1-204ENST00000358866 3310 ntAPPRIS P2 TSL 5 BASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 FAM107B-206ENST00000378470 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 PHF19-214ENST00000616568 4159 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 TSGA10-203ENST00000393483 3878 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 FADS1-211ENST00000536991 2701 ntTSL 2 BASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 PRDM10-201ENST00000304538 5817 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 FABP5-201ENST00000297258 851 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 C4BPB-203ENST00000367078 978 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 SH3KBP1-203ENST00000379716 3819 ntTSL 2 BASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 LRRC72-202ENST00000401542 1000 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 LINC02470-201ENST00000412084 979 ntTSL 2 BASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 AP006193.1-201ENST00000440724 485 ntBASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 OR2AI1P-201ENST00000448534 932 ntBASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 AC091805.1-201ENST00000498395 342 ntBASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 CLDND1-205ENST00000502288 560 ntTSL 4 BASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 OR10J8P-201ENST00000504659 929 ntBASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 AC098827.1-201ENST00000514630 667 ntBASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 ELL2P2-201ENST00000515135 694 ntBASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 RNA5SP422-201ENST00000516778 111 ntBASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 ATP5L-202ENST00000524422 720 ntTSL 3 BASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 AL050327.1-201ENST00000525424 507 ntTSL 4 BASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 NTAN1P3-201ENST00000535885 715 ntBASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 TAS2R38-201ENST00000547270 1143 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 AL357093.2-202ENST00000556942 498 ntTSL 2 BASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 HMGN2P46-207ENST00000568669 388 ntTSL 3 BASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 AC011477.1-201ENST00000591884 544 ntTSL 5 BASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 EDRF1-AS1-205ENST00000601363 712 ntTSL 5 BASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 LINC00837-203ENST00000608061 555 ntTSL 4 BASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 AC068631.1-255ENST00000608173 588 ntTSL 5 BASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 TMPRSS4-220ENST00000618855 3531 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 HRNR-201ENST00000368801 9623 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 CACNA2D4-221ENST00000586184 3499 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 LINC00243-201ENST00000399196 2052 ntTSL 2 BASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 AL929601.3-201ENST00000613990 2086 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 STAU2-215ENST00000521727 3953 ntTSL 5 BASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 SZRD1-202ENST00000401089 3447 ntTSL 2 BASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 LRRC40-201ENST00000370952 2884 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 C11orf57-201ENST00000280352 3693 ntAPPRIS ALT1 TSL 2 BASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 CPT1B-201ENST00000312108 2592 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 MICAL2-217ENST00000527546 3358 ntTSL 5 BASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 MARK3-207ENST00000553942 2298 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 CXorf57-202ENST00000372548 3861 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 SPIN4-201ENST00000374884 4117 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms