Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 GABPB1-205ENST00000429662 1392 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
SNX18Q96RF0 EEF1A1P6-201ENST00000434005 1384 ntBASIC8.23□□□□□ -1.09
SNX18Q96RF0 MEF2A-203ENST00000449277 5182 ntTSL 5 BASIC8.23□□□□□ -1.09
SNX18Q96RF0 AL512634.1-201ENST00000566873 2432 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
SNX18Q96RF0 NCAPH-201ENST00000240423 2763 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
SNX18Q96RF0 RUNX1T1-203ENST00000396218 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SNX18Q96RF0 GBP4-201ENST00000355754 6127 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SNX18Q96RF0 PDE6A-201ENST00000255266 5642 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SNX18Q96RF0 MAPK10-301ENST00000641313 2482 ntBASIC8.23□□□□□ -1.09
SNX18Q96RF0 UPF2-202ENST00000357604 5193 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SNX18Q96RF0 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
SNX18Q96RF0 AP003352.1-201ENST00000501016 1989 ntTSL 5 BASIC8.23□□□□□ -1.09
SNX18Q96RF0 SLC25A14-201ENST00000218197 1616 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
SNX18Q96RF0 APOBEC2-201ENST00000244669 1151 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SNX18Q96RF0 BMP15-201ENST00000252677 1179 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SNX18Q96RF0 SPIN2B-201ENST00000275988 1152 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SNX18Q96RF0 OR51G2-201ENST00000322013 1023 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
SNX18Q96RF0 OR13C8-201ENST00000335040 963 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
SNX18Q96RF0 CALCA-202ENST00000361010 916 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
SNX18Q96RF0 REG3A-203ENST00000409839 788 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
SNX18Q96RF0 AC145543.1-201ENST00000424770 586 ntTSL 5 BASIC8.23□□□□□ -1.09
SNX18Q96RF0 NR1I3-209ENST00000428574 1117 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
SNX18Q96RF0 AL133325.2-201ENST00000431034 449 ntTSL 2 BASIC8.23□□□□□ -1.09
SNX18Q96RF0 AC099568.1-201ENST00000432395 509 ntTSL 3 BASIC8.23□□□□□ -1.09
SNX18Q96RF0 FBXO36-IT1-201ENST00000432957 582 ntTSL 3 BASIC8.23□□□□□ -1.09
SNX18Q96RF0 AC073115.1-201ENST00000436056 532 ntTSL 4 BASIC8.23□□□□□ -1.09
SNX18Q96RF0 NR1I3-211ENST00000442691 1114 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
SNX18Q96RF0 AL133387.3-201ENST00000450669 522 ntTSL 5 BASIC8.23□□□□□ -1.09
SNX18Q96RF0 AC130689.1-201ENST00000451056 408 ntBASIC8.23□□□□□ -1.09
SNX18Q96RF0 AL360181.1-201ENST00000452591 184 ntTSL 5 BASIC8.23□□□□□ -1.09
SNX18Q96RF0 RN7SL250P-201ENST00000475154 258 ntBASIC8.23□□□□□ -1.09
SNX18Q96RF0 DLEU1-220ENST00000478860 602 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
SNX18Q96RF0 AC091917.2-201ENST00000505002 744 ntBASIC8.23□□□□□ -1.09
SNX18Q96RF0 NR1I3-228ENST00000511676 1061 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
SNX18Q96RF0 NR1I3-230ENST00000511944 620 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
SNX18Q96RF0 NR1I3-232ENST00000512372 861 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
SNX18Q96RF0 ALDH1L1-AS1-201ENST00000512384 437 ntTSL 3 BASIC8.23□□□□□ -1.09
SNX18Q96RF0 AC006499.7-201ENST00000512421 1117 ntBASIC8.23□□□□□ -1.09
SNX18Q96RF0 AC008581.1-201ENST00000512650 385 ntTSL 3 BASIC8.23□□□□□ -1.09
SNX18Q96RF0 GAPDHP60-201ENST00000513846 995 ntBASIC8.23□□□□□ -1.09
SNX18Q96RF0 NR1I3-234ENST00000515621 1130 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
SNX18Q96RF0 AC104232.1-201ENST00000522106 875 ntTSL 3 BASIC8.23□□□□□ -1.09
SNX18Q96RF0 LINC02548-201ENST00000531749 484 ntTSL 3 BASIC8.23□□□□□ -1.09
SNX18Q96RF0 PRR13-206ENST00000549135 755 ntAPPRIS ALT2 TSL 3 BASIC8.23□□□□□ -1.09
SNX18Q96RF0 AL049873.2-201ENST00000555790 498 ntBASIC8.23□□□□□ -1.09
SNX18Q96RF0 AC079789.1-201ENST00000561655 885 ntBASIC8.23□□□□□ -1.09
SNX18Q96RF0 AC009108.2-201ENST00000566485 269 ntTSL 5 BASIC8.23□□□□□ -1.09
SNX18Q96RF0 AC010776.1-201ENST00000588298 542 ntTSL 4 BASIC8.23□□□□□ -1.09
SNX18Q96RF0 PSMG2-210ENST00000590217 1036 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
SNX18Q96RF0 HCG18-247ENST00000602698 573 ntTSL 3 BASIC8.23□□□□□ -1.09
SNX18Q96RF0 MCM8-205ENST00000610722 7486 ntAPPRIS P4 TSL 1 (best) BASIC8.23□□□□□ -1.09
SNX18Q96RF0 AC087501.5-201ENST00000607496 2374 ntBASIC8.23□□□□□ -1.09
SNX18Q96RF0 PCBP2-207ENST00000546463 1457 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
SNX18Q96RF0 FBXL17-206ENST00000619412 4059 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
SNX18Q96RF0 CD180-201ENST00000256447 5388 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SNX18Q96RF0 STARD5-201ENST00000302824 4871 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SNX18Q96RF0 KAT6A-203ENST00000406337 9241 ntAPPRIS P3 TSL 5 BASIC8.23□□□□□ -1.09
SNX18Q96RF0 PART1-202ENST00000506884 2068 ntTSL 2 BASIC8.23□□□□□ -1.09
SNX18Q96RF0 AC091304.1-201ENST00000564897 3034 ntBASIC8.23□□□□□ -1.09
SNX18Q96RF0 FREM1-203ENST00000380894 2481 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
SNX18Q96RF0 LRRC37A-202ENST00000393465 4997 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
SNX18Q96RF0 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC8.23□□□□□ -1.09
SNX18Q96RF0 PEG10-206ENST00000612941 6392 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
SNX18Q96RF0 PEG10-209ENST00000617526 6392 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
SNX18Q96RF0 TARS-204ENST00000502553 2534 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
SNX18Q96RF0 BMS1P1-202ENST00000580094 4294 ntTSL 5 BASIC8.23□□□□□ -1.09
SNX18Q96RF0 EXOC6-204ENST00000443748 3310 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
SNX18Q96RF0 HNRNPKP2-201ENST00000447355 1390 ntBASIC8.22□□□□□ -1.09
SNX18Q96RF0 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
SNX18Q96RF0 SGMS1-AS1-201ENST00000443374 12400 ntTSL 4 BASIC8.22□□□□□ -1.09
SNX18Q96RF0 AC006019.2-201ENST00000451116 3044 ntTSL 2 BASIC8.22□□□□□ -1.09
SNX18Q96RF0 AC092681.2-201ENST00000565102 3044 ntTSL 2 BASIC8.22□□□□□ -1.09
SNX18Q96RF0 SOSTDC1-202ENST00000396652 2411 ntTSL 2 BASIC8.22□□□□□ -1.09
SNX18Q96RF0 FAM107A-202ENST00000394481 3465 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
SNX18Q96RF0 AC036108.3-201ENST00000564527 2677 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
SNX18Q96RF0 ZNF407-207ENST00000582337 5662 ntTSL 5 BASIC8.22□□□□□ -1.09
SNX18Q96RF0 ALDH7A1-227ENST00000636879 2501 ntTSL 5 BASIC8.22□□□□□ -1.09
SNX18Q96RF0 AGBL4-202ENST00000371836 1454 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
SNX18Q96RF0 RBMS2-207ENST00000552247 1471 ntTSL 5 BASIC8.22□□□□□ -1.09
SNX18Q96RF0 SNHG14-226ENST00000640631 13074 ntTSL 5 BASIC8.22□□□□□ -1.09
SNX18Q96RF0 AC016205.1-201ENST00000591629 2306 ntTSL 2 BASIC8.22□□□□□ -1.09
SNX18Q96RF0 OR52K1-201ENST00000307632 1030 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
SNX18Q96RF0 RPS21-201ENST00000343986 344 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
SNX18Q96RF0 C4BPB-203ENST00000367078 978 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
SNX18Q96RF0 WTAPP1-201ENST00000371455 546 ntTSL 4 BASIC8.22□□□□□ -1.09
SNX18Q96RF0 AL356273.2-201ENST00000413701 973 ntBASIC8.22□□□□□ -1.09
SNX18Q96RF0 CDKN2AIPNLP3-201ENST00000418361 309 ntBASIC8.22□□□□□ -1.09
SNX18Q96RF0 ADGRF5P1-201ENST00000435875 1135 ntBASIC8.22□□□□□ -1.09
SNX18Q96RF0 DNAJA1P6-201ENST00000437347 354 ntBASIC8.22□□□□□ -1.09
SNX18Q96RF0 RPL12P44-201ENST00000442319 502 ntBASIC8.22□□□□□ -1.09
SNX18Q96RF0 OR5BH1P-201ENST00000454101 919 ntBASIC8.22□□□□□ -1.09
SNX18Q96RF0 AC104451.1-201ENST00000458010 176 ntBASIC8.22□□□□□ -1.09
SNX18Q96RF0 CREB3L2-205ENST00000458726 776 ntTSL 3 BASIC8.22□□□□□ -1.09
SNX18Q96RF0 RN7SL666P-201ENST00000460953 304 ntBASIC8.22□□□□□ -1.09
SNX18Q96RF0 PAICSP6-201ENST00000462572 1280 ntBASIC8.22□□□□□ -1.09
SNX18Q96RF0 RN7SL402P-201ENST00000465059 264 ntBASIC8.22□□□□□ -1.09
SNX18Q96RF0 TRAF3IP3-212ENST00000477431 791 ntTSL 3 BASIC8.22□□□□□ -1.09
SNX18Q96RF0 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
SNX18Q96RF0 RN7SL519P-201ENST00000497925 288 ntBASIC8.22□□□□□ -1.09
SNX18Q96RF0 NUP210P3-201ENST00000506964 388 ntBASIC8.22□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms