Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HCFC2Q9Y5Z7 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
HCFC2Q9Y5Z7 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.55■■□□□ 1.04
HCFC2Q9Y5Z7 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.55■■□□□ 1.04
HCFC2Q9Y5Z7 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HCFC2Q9Y5Z7 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HCFC2Q9Y5Z7 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
HCFC2Q9Y5Z7 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HCFC2Q9Y5Z7 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.55■■□□□ 1.04
HCFC2Q9Y5Z7 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HCFC2Q9Y5Z7 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21.54■■□□□ 1.04
HCFC2Q9Y5Z7 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
HCFC2Q9Y5Z7 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HCFC2Q9Y5Z7 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
HCFC2Q9Y5Z7 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
HCFC2Q9Y5Z7 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
HCFC2Q9Y5Z7 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
HCFC2Q9Y5Z7 AL390719.1-204ENST00000412397 1219 ntBASIC21.54■■□□□ 1.04
HCFC2Q9Y5Z7 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HCFC2Q9Y5Z7 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC21.54■■□□□ 1.04
HCFC2Q9Y5Z7 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.54■■□□□ 1.04
HCFC2Q9Y5Z7 PRKY-204ENST00000533551 1019 ntBASIC21.54■■□□□ 1.04
HCFC2Q9Y5Z7 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.54■■□□□ 1.04
HCFC2Q9Y5Z7 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC21.54■■□□□ 1.04
HCFC2Q9Y5Z7 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.54■■□□□ 1.04
HCFC2Q9Y5Z7 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
HCFC2Q9Y5Z7 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
HCFC2Q9Y5Z7 AL356652.1-201ENST00000615962 565 ntBASIC21.54■■□□□ 1.04
HCFC2Q9Y5Z7 CABP2-204ENST00000636477 941 ntTSL 5 BASIC21.54■■□□□ 1.04
HCFC2Q9Y5Z7 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
HCFC2Q9Y5Z7 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HCFC2Q9Y5Z7 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HCFC2Q9Y5Z7 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HCFC2Q9Y5Z7 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
HCFC2Q9Y5Z7 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HCFC2Q9Y5Z7 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.53■■□□□ 1.04
HCFC2Q9Y5Z7 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HCFC2Q9Y5Z7 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
HCFC2Q9Y5Z7 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
HCFC2Q9Y5Z7 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.53■■□□□ 1.04
HCFC2Q9Y5Z7 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HCFC2Q9Y5Z7 AL355075.4-201ENST00000554988 638 ntBASIC21.53■■□□□ 1.04
HCFC2Q9Y5Z7 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HCFC2Q9Y5Z7 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC21.53■■□□□ 1.04
HCFC2Q9Y5Z7 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HCFC2Q9Y5Z7 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.53■■□□□ 1.04
HCFC2Q9Y5Z7 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HCFC2Q9Y5Z7 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HCFC2Q9Y5Z7 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
HCFC2Q9Y5Z7 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HCFC2Q9Y5Z7 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HCFC2Q9Y5Z7 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
HCFC2Q9Y5Z7 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HCFC2Q9Y5Z7 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HCFC2Q9Y5Z7 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
HCFC2Q9Y5Z7 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HCFC2Q9Y5Z7 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HCFC2Q9Y5Z7 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
HCFC2Q9Y5Z7 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HCFC2Q9Y5Z7 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HCFC2Q9Y5Z7 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC21.52■■□□□ 1.04
HCFC2Q9Y5Z7 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
HCFC2Q9Y5Z7 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC21.52■■□□□ 1.04
HCFC2Q9Y5Z7 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.52■■□□□ 1.04
HCFC2Q9Y5Z7 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC21.52■■□□□ 1.04
HCFC2Q9Y5Z7 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HCFC2Q9Y5Z7 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
HCFC2Q9Y5Z7 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.52■■□□□ 1.04
HCFC2Q9Y5Z7 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HCFC2Q9Y5Z7 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
HCFC2Q9Y5Z7 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HCFC2Q9Y5Z7 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.51■■□□□ 1.03
HCFC2Q9Y5Z7 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
HCFC2Q9Y5Z7 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.51■■□□□ 1.03
HCFC2Q9Y5Z7 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.51■■□□□ 1.03
HCFC2Q9Y5Z7 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
HCFC2Q9Y5Z7 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
HCFC2Q9Y5Z7 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC21.51■■□□□ 1.03
HCFC2Q9Y5Z7 PENK-204ENST00000518770 863 ntTSL 2 BASIC21.51■■□□□ 1.03
HCFC2Q9Y5Z7 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC21.51■■□□□ 1.03
HCFC2Q9Y5Z7 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.51■■□□□ 1.03
HCFC2Q9Y5Z7 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC21.51■■□□□ 1.03
HCFC2Q9Y5Z7 AC097493.4-201ENST00000641197 219 ntBASIC21.51■■□□□ 1.03
HCFC2Q9Y5Z7 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.51■■□□□ 1.03
HCFC2Q9Y5Z7 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.51■■□□□ 1.03
HCFC2Q9Y5Z7 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HCFC2Q9Y5Z7 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.51■■□□□ 1.03
HCFC2Q9Y5Z7 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
HCFC2Q9Y5Z7 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HCFC2Q9Y5Z7 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
HCFC2Q9Y5Z7 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HCFC2Q9Y5Z7 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
HCFC2Q9Y5Z7 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
HCFC2Q9Y5Z7 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
HCFC2Q9Y5Z7 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
HCFC2Q9Y5Z7 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.5■■□□□ 1.03
HCFC2Q9Y5Z7 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HCFC2Q9Y5Z7 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.5■■□□□ 1.03
HCFC2Q9Y5Z7 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HCFC2Q9Y5Z7 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms