Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.88■□□□□ 0.45
RHBDD3Q9Y3P4 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.88■□□□□ 0.45
RHBDD3Q9Y3P4 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC17.88■□□□□ 0.45
RHBDD3Q9Y3P4 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RHBDD3Q9Y3P4 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RHBDD3Q9Y3P4 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
RHBDD3Q9Y3P4 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
RHBDD3Q9Y3P4 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
RHBDD3Q9Y3P4 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.87■□□□□ 0.45
RHBDD3Q9Y3P4 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RHBDD3Q9Y3P4 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.87■□□□□ 0.45
RHBDD3Q9Y3P4 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RHBDD3Q9Y3P4 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.87■□□□□ 0.45
RHBDD3Q9Y3P4 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RHBDD3Q9Y3P4 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
RHBDD3Q9Y3P4 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.87■□□□□ 0.45
RHBDD3Q9Y3P4 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
RHBDD3Q9Y3P4 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RHBDD3Q9Y3P4 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.87■□□□□ 0.45
RHBDD3Q9Y3P4 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RHBDD3Q9Y3P4 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.87■□□□□ 0.45
RHBDD3Q9Y3P4 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RHBDD3Q9Y3P4 AC010141.2-201ENST00000452426 721 ntBASIC17.87■□□□□ 0.45
RHBDD3Q9Y3P4 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.87■□□□□ 0.45
RHBDD3Q9Y3P4 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.87■□□□□ 0.45
RHBDD3Q9Y3P4 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.87■□□□□ 0.45
RHBDD3Q9Y3P4 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.87■□□□□ 0.45
RHBDD3Q9Y3P4 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.87■□□□□ 0.45
RHBDD3Q9Y3P4 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC17.87■□□□□ 0.45
RHBDD3Q9Y3P4 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
RHBDD3Q9Y3P4 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.87■□□□□ 0.45
RHBDD3Q9Y3P4 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RHBDD3Q9Y3P4 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RHBDD3Q9Y3P4 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RHBDD3Q9Y3P4 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.87■□□□□ 0.45
RHBDD3Q9Y3P4 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RHBDD3Q9Y3P4 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RHBDD3Q9Y3P4 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RHBDD3Q9Y3P4 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC17.87■□□□□ 0.45
RHBDD3Q9Y3P4 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
RHBDD3Q9Y3P4 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RHBDD3Q9Y3P4 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
RHBDD3Q9Y3P4 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RHBDD3Q9Y3P4 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.86■□□□□ 0.45
RHBDD3Q9Y3P4 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
RHBDD3Q9Y3P4 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
RHBDD3Q9Y3P4 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.86■□□□□ 0.45
RHBDD3Q9Y3P4 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RHBDD3Q9Y3P4 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.86■□□□□ 0.45
RHBDD3Q9Y3P4 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RHBDD3Q9Y3P4 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RHBDD3Q9Y3P4 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RHBDD3Q9Y3P4 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
RHBDD3Q9Y3P4 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
RHBDD3Q9Y3P4 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.86■□□□□ 0.45
RHBDD3Q9Y3P4 DUX4L2-201ENST00000561772 1275 ntBASIC17.86■□□□□ 0.45
RHBDD3Q9Y3P4 AP001160.3-201ENST00000601484 763 ntBASIC17.86■□□□□ 0.45
RHBDD3Q9Y3P4 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.86■□□□□ 0.45
RHBDD3Q9Y3P4 DUX4L6-201ENST00000626483 1275 ntBASIC17.86■□□□□ 0.45
RHBDD3Q9Y3P4 DUX4L1-201ENST00000627662 1275 ntBASIC17.86■□□□□ 0.45
RHBDD3Q9Y3P4 DUX4L8-201ENST00000629013 1275 ntBASIC17.86■□□□□ 0.45
RHBDD3Q9Y3P4 DUX4L3-201ENST00000630187 1275 ntBASIC17.86■□□□□ 0.45
RHBDD3Q9Y3P4 DUX4L7-201ENST00000630678 1275 ntBASIC17.86■□□□□ 0.45
RHBDD3Q9Y3P4 DUX4L5-201ENST00000630834 1275 ntBASIC17.86■□□□□ 0.45
RHBDD3Q9Y3P4 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC17.86■□□□□ 0.45
RHBDD3Q9Y3P4 AC004854.2-201ENST00000608450 1441 ntBASIC17.86■□□□□ 0.45
RHBDD3Q9Y3P4 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RHBDD3Q9Y3P4 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RHBDD3Q9Y3P4 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RHBDD3Q9Y3P4 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RHBDD3Q9Y3P4 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RHBDD3Q9Y3P4 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
RHBDD3Q9Y3P4 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RHBDD3Q9Y3P4 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RHBDD3Q9Y3P4 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RHBDD3Q9Y3P4 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RHBDD3Q9Y3P4 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
RHBDD3Q9Y3P4 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
RHBDD3Q9Y3P4 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.86■□□□□ 0.45
RHBDD3Q9Y3P4 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.86■□□□□ 0.45
RHBDD3Q9Y3P4 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.86■□□□□ 0.45
RHBDD3Q9Y3P4 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RHBDD3Q9Y3P4 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RHBDD3Q9Y3P4 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RHBDD3Q9Y3P4 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RHBDD3Q9Y3P4 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RHBDD3Q9Y3P4 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
RHBDD3Q9Y3P4 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RHBDD3Q9Y3P4 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RHBDD3Q9Y3P4 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RHBDD3Q9Y3P4 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RHBDD3Q9Y3P4 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RHBDD3Q9Y3P4 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.85■□□□□ 0.45
RHBDD3Q9Y3P4 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.85■□□□□ 0.45
RHBDD3Q9Y3P4 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RHBDD3Q9Y3P4 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RHBDD3Q9Y3P4 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.85■□□□□ 0.45
RHBDD3Q9Y3P4 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
RHBDD3Q9Y3P4 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RHBDD3Q9Y3P4 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms