Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
LRCH1Q9Y2L9 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LRCH1Q9Y2L9 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRCH1Q9Y2L9 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRCH1Q9Y2L9 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRCH1Q9Y2L9 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRCH1Q9Y2L9 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRCH1Q9Y2L9 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LRCH1Q9Y2L9 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRCH1Q9Y2L9 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRCH1Q9Y2L9 AL049812.1-201ENST00000432563 2267 ntBASIC19.41■□□□□ 0.7
LRCH1Q9Y2L9 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.41■□□□□ 0.7
LRCH1Q9Y2L9 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LRCH1Q9Y2L9 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
LRCH1Q9Y2L9 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRCH1Q9Y2L9 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LRCH1Q9Y2L9 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
LRCH1Q9Y2L9 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRCH1Q9Y2L9 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRCH1Q9Y2L9 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
LRCH1Q9Y2L9 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRCH1Q9Y2L9 AL356441.2-201ENST00000443009 864 ntBASIC19.41■□□□□ 0.7
LRCH1Q9Y2L9 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.41■□□□□ 0.7
LRCH1Q9Y2L9 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.41■□□□□ 0.7
LRCH1Q9Y2L9 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRCH1Q9Y2L9 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRCH1Q9Y2L9 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRCH1Q9Y2L9 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRCH1Q9Y2L9 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
LRCH1Q9Y2L9 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.41■□□□□ 0.7
LRCH1Q9Y2L9 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRCH1Q9Y2L9 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRCH1Q9Y2L9 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
LRCH1Q9Y2L9 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
LRCH1Q9Y2L9 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LRCH1Q9Y2L9 AF131216.4-201ENST00000638924 1588 ntBASIC19.4■□□□□ 0.7
LRCH1Q9Y2L9 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.4■□□□□ 0.7
LRCH1Q9Y2L9 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.4■□□□□ 0.7
LRCH1Q9Y2L9 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRCH1Q9Y2L9 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.4■□□□□ 0.7
LRCH1Q9Y2L9 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.4■□□□□ 0.7
LRCH1Q9Y2L9 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
LRCH1Q9Y2L9 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRCH1Q9Y2L9 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
LRCH1Q9Y2L9 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRCH1Q9Y2L9 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LRCH1Q9Y2L9 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRCH1Q9Y2L9 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LRCH1Q9Y2L9 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.4■□□□□ 0.7
LRCH1Q9Y2L9 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRCH1Q9Y2L9 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRCH1Q9Y2L9 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRCH1Q9Y2L9 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.4■□□□□ 0.7
LRCH1Q9Y2L9 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRCH1Q9Y2L9 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
LRCH1Q9Y2L9 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
LRCH1Q9Y2L9 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
LRCH1Q9Y2L9 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.39■□□□□ 0.7
LRCH1Q9Y2L9 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.39■□□□□ 0.69
LRCH1Q9Y2L9 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRCH1Q9Y2L9 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRCH1Q9Y2L9 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.39■□□□□ 0.69
LRCH1Q9Y2L9 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.39■□□□□ 0.69
LRCH1Q9Y2L9 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.39■□□□□ 0.69
LRCH1Q9Y2L9 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRCH1Q9Y2L9 AC092028.1-203ENST00000608262 953 ntBASIC19.39■□□□□ 0.69
LRCH1Q9Y2L9 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
LRCH1Q9Y2L9 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.39■□□□□ 0.69
LRCH1Q9Y2L9 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.39■□□□□ 0.69
LRCH1Q9Y2L9 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LRCH1Q9Y2L9 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRCH1Q9Y2L9 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
LRCH1Q9Y2L9 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.39■□□□□ 0.69
LRCH1Q9Y2L9 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRCH1Q9Y2L9 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRCH1Q9Y2L9 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRCH1Q9Y2L9 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
LRCH1Q9Y2L9 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
LRCH1Q9Y2L9 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRCH1Q9Y2L9 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRCH1Q9Y2L9 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
LRCH1Q9Y2L9 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRCH1Q9Y2L9 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
LRCH1Q9Y2L9 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.38■□□□□ 0.69
LRCH1Q9Y2L9 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRCH1Q9Y2L9 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.38■□□□□ 0.69
LRCH1Q9Y2L9 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
LRCH1Q9Y2L9 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRCH1Q9Y2L9 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
LRCH1Q9Y2L9 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.38■□□□□ 0.69
LRCH1Q9Y2L9 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
LRCH1Q9Y2L9 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRCH1Q9Y2L9 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRCH1Q9Y2L9 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRCH1Q9Y2L9 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LRCH1Q9Y2L9 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRCH1Q9Y2L9 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.37■□□□□ 0.69
LRCH1Q9Y2L9 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRCH1Q9Y2L9 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRCH1Q9Y2L9 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms