Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
ZC3H4Q9UPT8 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
ZC3H4Q9UPT8 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC24.96■■□□□ 1.59
ZC3H4Q9UPT8 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC24.95■■□□□ 1.59
ZC3H4Q9UPT8 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC24.95■■□□□ 1.58
ZC3H4Q9UPT8 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.58
ZC3H4Q9UPT8 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC24.95■■□□□ 1.58
ZC3H4Q9UPT8 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC24.95■■□□□ 1.58
ZC3H4Q9UPT8 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC24.95■■□□□ 1.58
ZC3H4Q9UPT8 AL031963.3-201ENST00000606441 850 ntBASIC24.95■■□□□ 1.58
ZC3H4Q9UPT8 AC073195.1-201ENST00000607241 877 ntBASIC24.95■■□□□ 1.58
ZC3H4Q9UPT8 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC24.95■■□□□ 1.58
ZC3H4Q9UPT8 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC24.95■■□□□ 1.58
ZC3H4Q9UPT8 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC24.95■■□□□ 1.58
ZC3H4Q9UPT8 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
ZC3H4Q9UPT8 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.58
ZC3H4Q9UPT8 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
ZC3H4Q9UPT8 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC24.95■■□□□ 1.58
ZC3H4Q9UPT8 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC24.95■■□□□ 1.58
ZC3H4Q9UPT8 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
ZC3H4Q9UPT8 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
ZC3H4Q9UPT8 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
ZC3H4Q9UPT8 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
ZC3H4Q9UPT8 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC24.94■■□□□ 1.58
ZC3H4Q9UPT8 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
ZC3H4Q9UPT8 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC24.94■■□□□ 1.58
ZC3H4Q9UPT8 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC24.94■■□□□ 1.58
ZC3H4Q9UPT8 FAM197Y1-201ENST00000421178 764 ntBASIC24.94■■□□□ 1.58
ZC3H4Q9UPT8 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC24.94■■□□□ 1.58
ZC3H4Q9UPT8 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
ZC3H4Q9UPT8 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC24.94■■□□□ 1.58
ZC3H4Q9UPT8 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
ZC3H4Q9UPT8 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
ZC3H4Q9UPT8 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC24.94■■□□□ 1.58
ZC3H4Q9UPT8 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC24.94■■□□□ 1.58
ZC3H4Q9UPT8 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
ZC3H4Q9UPT8 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
ZC3H4Q9UPT8 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
ZC3H4Q9UPT8 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC24.93■■□□□ 1.58
ZC3H4Q9UPT8 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC24.93■■□□□ 1.58
ZC3H4Q9UPT8 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC24.93■■□□□ 1.58
ZC3H4Q9UPT8 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC24.93■■□□□ 1.58
ZC3H4Q9UPT8 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC24.93■■□□□ 1.58
ZC3H4Q9UPT8 AP000525.1-201ENST00000608286 694 ntBASIC24.93■■□□□ 1.58
ZC3H4Q9UPT8 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC24.93■■□□□ 1.58
ZC3H4Q9UPT8 AC079834.2-201ENST00000609776 1949 ntBASIC24.93■■□□□ 1.58
ZC3H4Q9UPT8 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
ZC3H4Q9UPT8 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
ZC3H4Q9UPT8 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
ZC3H4Q9UPT8 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
ZC3H4Q9UPT8 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
ZC3H4Q9UPT8 SLC25A3P1-201ENST00000443844 931 ntBASIC24.92■■□□□ 1.58
ZC3H4Q9UPT8 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC24.92■■□□□ 1.58
ZC3H4Q9UPT8 CFL2-205ENST00000555765 632 ntTSL 2 BASIC24.92■■□□□ 1.58
ZC3H4Q9UPT8 NAPSB-206ENST00000562112 1266 ntBASIC24.92■■□□□ 1.58
ZC3H4Q9UPT8 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC24.92■■□□□ 1.58
ZC3H4Q9UPT8 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC24.92■■□□□ 1.58
ZC3H4Q9UPT8 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC24.92■■□□□ 1.58
ZC3H4Q9UPT8 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC24.92■■□□□ 1.58
ZC3H4Q9UPT8 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC24.92■■□□□ 1.58
ZC3H4Q9UPT8 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC24.92■■□□□ 1.58
ZC3H4Q9UPT8 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
ZC3H4Q9UPT8 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
ZC3H4Q9UPT8 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC24.92■■□□□ 1.58
ZC3H4Q9UPT8 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
ZC3H4Q9UPT8 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
ZC3H4Q9UPT8 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC24.91■■□□□ 1.58
ZC3H4Q9UPT8 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
ZC3H4Q9UPT8 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
ZC3H4Q9UPT8 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC24.91■■□□□ 1.58
ZC3H4Q9UPT8 REXO1L10P-201ENST00000615707 1290 ntBASIC24.91■■□□□ 1.58
ZC3H4Q9UPT8 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC24.91■■□□□ 1.58
ZC3H4Q9UPT8 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
ZC3H4Q9UPT8 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC24.91■■□□□ 1.58
ZC3H4Q9UPT8 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
ZC3H4Q9UPT8 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
ZC3H4Q9UPT8 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC24.91■■□□□ 1.58
ZC3H4Q9UPT8 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC24.91■■□□□ 1.58
ZC3H4Q9UPT8 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
ZC3H4Q9UPT8 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
ZC3H4Q9UPT8 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
ZC3H4Q9UPT8 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
ZC3H4Q9UPT8 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC24.9■■□□□ 1.58
ZC3H4Q9UPT8 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
ZC3H4Q9UPT8 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
ZC3H4Q9UPT8 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC24.9■■□□□ 1.58
ZC3H4Q9UPT8 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
ZC3H4Q9UPT8 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
ZC3H4Q9UPT8 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC24.9■■□□□ 1.58
ZC3H4Q9UPT8 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
ZC3H4Q9UPT8 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC24.9■■□□□ 1.58
ZC3H4Q9UPT8 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC24.9■■□□□ 1.58
ZC3H4Q9UPT8 AL121829.2-201ENST00000620908 328 ntBASIC24.9■■□□□ 1.58
ZC3H4Q9UPT8 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
ZC3H4Q9UPT8 MOK-233ENST00000524214 1539 ntTSL 2 BASIC24.9■■□□□ 1.58
ZC3H4Q9UPT8 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
ZC3H4Q9UPT8 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC24.89■■□□□ 1.58
ZC3H4Q9UPT8 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
ZC3H4Q9UPT8 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
ZC3H4Q9UPT8 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC24.89■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms