Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NOTCH3Q9UM47 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NOTCH3Q9UM47 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
NOTCH3Q9UM47 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC15.74■□□□□ 0.11
NOTCH3Q9UM47 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
NOTCH3Q9UM47 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC15.74■□□□□ 0.11
NOTCH3Q9UM47 MCRIP2P1-201ENST00000394346 511 ntBASIC15.74■□□□□ 0.11
NOTCH3Q9UM47 MIR1224-201ENST00000408193 85 ntBASIC15.74■□□□□ 0.11
NOTCH3Q9UM47 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC15.74■□□□□ 0.11
NOTCH3Q9UM47 C1QBPP2-201ENST00000528754 825 ntBASIC15.74■□□□□ 0.11
NOTCH3Q9UM47 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NOTCH3Q9UM47 GCK-205ENST00000437084 1385 ntTSL 5 BASIC15.74■□□□□ 0.11
NOTCH3Q9UM47 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
NOTCH3Q9UM47 EP400NL-214ENST00000641289 2402 ntBASIC15.74■□□□□ 0.11
NOTCH3Q9UM47 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NOTCH3Q9UM47 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NOTCH3Q9UM47 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
NOTCH3Q9UM47 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NOTCH3Q9UM47 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NOTCH3Q9UM47 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC15.73■□□□□ 0.11
NOTCH3Q9UM47 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NOTCH3Q9UM47 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC15.73■□□□□ 0.11
NOTCH3Q9UM47 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC15.73■□□□□ 0.11
NOTCH3Q9UM47 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NOTCH3Q9UM47 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
NOTCH3Q9UM47 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC15.73■□□□□ 0.11
NOTCH3Q9UM47 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NOTCH3Q9UM47 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NOTCH3Q9UM47 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NOTCH3Q9UM47 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
NOTCH3Q9UM47 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
NOTCH3Q9UM47 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
NOTCH3Q9UM47 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NOTCH3Q9UM47 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NOTCH3Q9UM47 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NOTCH3Q9UM47 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
NOTCH3Q9UM47 STX6-204ENST00000542060 4809 ntTSL 2 BASIC15.73■□□□□ 0.11
NOTCH3Q9UM47 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
NOTCH3Q9UM47 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
NOTCH3Q9UM47 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NOTCH3Q9UM47 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
NOTCH3Q9UM47 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
NOTCH3Q9UM47 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
NOTCH3Q9UM47 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
NOTCH3Q9UM47 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NOTCH3Q9UM47 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC15.72■□□□□ 0.11
NOTCH3Q9UM47 AC060766.5-201ENST00000590539 871 ntBASIC15.72■□□□□ 0.11
NOTCH3Q9UM47 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
NOTCH3Q9UM47 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NOTCH3Q9UM47 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC15.72■□□□□ 0.11
NOTCH3Q9UM47 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NOTCH3Q9UM47 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC15.72■□□□□ 0.11
NOTCH3Q9UM47 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NOTCH3Q9UM47 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NOTCH3Q9UM47 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
NOTCH3Q9UM47 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
NOTCH3Q9UM47 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC15.72■□□□□ 0.11
NOTCH3Q9UM47 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC15.72■□□□□ 0.11
NOTCH3Q9UM47 OR2A1-AS1-207ENST00000486094 819 ntBASIC15.72■□□□□ 0.11
NOTCH3Q9UM47 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC15.72■□□□□ 0.11
NOTCH3Q9UM47 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NOTCH3Q9UM47 SOX15-203ENST00000570788 1093 ntBASIC15.72■□□□□ 0.11
NOTCH3Q9UM47 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC15.72■□□□□ 0.11
NOTCH3Q9UM47 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC15.72■□□□□ 0.11
NOTCH3Q9UM47 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
NOTCH3Q9UM47 AL359736.2-201ENST00000621992 437 ntBASIC15.72■□□□□ 0.11
NOTCH3Q9UM47 AC068473.5-201ENST00000616428 2072 ntBASIC15.72■□□□□ 0.11
NOTCH3Q9UM47 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
NOTCH3Q9UM47 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NOTCH3Q9UM47 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NOTCH3Q9UM47 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
NOTCH3Q9UM47 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NOTCH3Q9UM47 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC15.71■□□□□ 0.11
NOTCH3Q9UM47 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NOTCH3Q9UM47 ISG20-202ENST00000379224 540 ntTSL 3 BASIC15.71■□□□□ 0.11
NOTCH3Q9UM47 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NOTCH3Q9UM47 FAM210CP-201ENST00000445714 574 ntBASIC15.71■□□□□ 0.11
NOTCH3Q9UM47 SNORA78-201ENST00000459373 127 ntBASIC15.71■□□□□ 0.11
NOTCH3Q9UM47 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC15.71■□□□□ 0.11
NOTCH3Q9UM47 PPOX-219ENST00000544598 813 ntTSL 2 BASIC15.71■□□□□ 0.11
NOTCH3Q9UM47 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
NOTCH3Q9UM47 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NOTCH3Q9UM47 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NOTCH3Q9UM47 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC15.71■□□□□ 0.11
NOTCH3Q9UM47 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NOTCH3Q9UM47 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
NOTCH3Q9UM47 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
NOTCH3Q9UM47 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NOTCH3Q9UM47 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NOTCH3Q9UM47 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
NOTCH3Q9UM47 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC15.71■□□□□ 0.1
NOTCH3Q9UM47 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
NOTCH3Q9UM47 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
NOTCH3Q9UM47 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
NOTCH3Q9UM47 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
NOTCH3Q9UM47 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC15.71■□□□□ 0.1
NOTCH3Q9UM47 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC15.71■□□□□ 0.1
NOTCH3Q9UM47 REXO2-216ENST00000544196 452 ntTSL 3 BASIC15.71■□□□□ 0.1
NOTCH3Q9UM47 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
NOTCH3Q9UM47 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms