Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 TSPY23P-201ENST00000440136 739 ntBASIC33.09■■■□□ 2.89
RIMBP3Q9UFD9 AP002982.1-201ENST00000492365 877 ntBASIC33.09■■■□□ 2.89
RIMBP3Q9UFD9 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC33.09■■■□□ 2.89
RIMBP3Q9UFD9 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
RIMBP3Q9UFD9 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC33.08■■■□□ 2.89
RIMBP3Q9UFD9 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC33.08■■■□□ 2.89
RIMBP3Q9UFD9 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC33.08■■■□□ 2.89
RIMBP3Q9UFD9 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC33.08■■■□□ 2.89
RIMBP3Q9UFD9 AL390719.1-204ENST00000412397 1219 ntBASIC33.08■■■□□ 2.89
RIMBP3Q9UFD9 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC33.08■■■□□ 2.89
RIMBP3Q9UFD9 FAM87A-204ENST00000613235 858 ntBASIC33.08■■■□□ 2.89
RIMBP3Q9UFD9 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC33.08■■■□□ 2.89
RIMBP3Q9UFD9 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC33.08■■■□□ 2.89
RIMBP3Q9UFD9 AC022211.4-201ENST00000625094 2161 ntBASIC33.07■■■□□ 2.89
RIMBP3Q9UFD9 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
RIMBP3Q9UFD9 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC33.07■■■□□ 2.88
RIMBP3Q9UFD9 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC33.07■■■□□ 2.88
RIMBP3Q9UFD9 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC33.07■■■□□ 2.88
RIMBP3Q9UFD9 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC33.07■■■□□ 2.88
RIMBP3Q9UFD9 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC33.07■■■□□ 2.88
RIMBP3Q9UFD9 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC33.07■■■□□ 2.88
RIMBP3Q9UFD9 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
RIMBP3Q9UFD9 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC33.07■■■□□ 2.88
RIMBP3Q9UFD9 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC33.07■■■□□ 2.88
RIMBP3Q9UFD9 TSPY14P-201ENST00000303979 915 ntBASIC33.06■■■□□ 2.88
RIMBP3Q9UFD9 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC33.06■■■□□ 2.88
RIMBP3Q9UFD9 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC33.06■■■□□ 2.88
RIMBP3Q9UFD9 PRR31-201ENST00000371629 978 ntTSL 2 BASIC33.06■■■□□ 2.88
RIMBP3Q9UFD9 YBX1P2-201ENST00000489612 999 ntBASIC33.06■■■□□ 2.88
RIMBP3Q9UFD9 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC33.06■■■□□ 2.88
RIMBP3Q9UFD9 AL139125.2-201ENST00000623134 1869 ntBASIC33.06■■■□□ 2.88
RIMBP3Q9UFD9 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
RIMBP3Q9UFD9 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC33.06■■■□□ 2.88
RIMBP3Q9UFD9 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC33.06■■■□□ 2.88
RIMBP3Q9UFD9 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC33.06■■■□□ 2.88
RIMBP3Q9UFD9 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC33.06■■■□□ 2.88
RIMBP3Q9UFD9 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC33.06■■■□□ 2.88
RIMBP3Q9UFD9 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC33.05■■■□□ 2.88
RIMBP3Q9UFD9 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC33.05■■■□□ 2.88
RIMBP3Q9UFD9 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
RIMBP3Q9UFD9 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
RIMBP3Q9UFD9 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
RIMBP3Q9UFD9 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC33.04■■■□□ 2.88
RIMBP3Q9UFD9 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC33.04■■■□□ 2.88
RIMBP3Q9UFD9 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC33.04■■■□□ 2.88
RIMBP3Q9UFD9 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC33.04■■■□□ 2.88
RIMBP3Q9UFD9 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC33.04■■■□□ 2.88
RIMBP3Q9UFD9 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC33.04■■■□□ 2.88
RIMBP3Q9UFD9 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
RIMBP3Q9UFD9 AC005332.1-201ENST00000577698 1310 ntBASIC33.04■■■□□ 2.88
RIMBP3Q9UFD9 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC33.04■■■□□ 2.88
RIMBP3Q9UFD9 KRT8P10-201ENST00000450021 1447 ntBASIC33.04■■■□□ 2.88
RIMBP3Q9UFD9 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
RIMBP3Q9UFD9 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC33.03■■■□□ 2.88
RIMBP3Q9UFD9 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
RIMBP3Q9UFD9 RNF152P1-201ENST00000397754 604 ntBASIC33.03■■■□□ 2.88
RIMBP3Q9UFD9 NIFKP9-201ENST00000419265 221 ntBASIC33.03■■■□□ 2.88
RIMBP3Q9UFD9 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC33.03■■■□□ 2.88
RIMBP3Q9UFD9 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
RIMBP3Q9UFD9 KRT16P1-201ENST00000399124 1418 ntBASIC33.03■■■□□ 2.88
RIMBP3Q9UFD9 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC33.03■■■□□ 2.88
RIMBP3Q9UFD9 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
RIMBP3Q9UFD9 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC33.03■■■□□ 2.88
RIMBP3Q9UFD9 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
RIMBP3Q9UFD9 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC33.02■■■□□ 2.88
RIMBP3Q9UFD9 F2R-202ENST00000505600 442 ntTSL 2 BASIC33.02■■■□□ 2.88
RIMBP3Q9UFD9 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC33.02■■■□□ 2.88
RIMBP3Q9UFD9 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
RIMBP3Q9UFD9 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
RIMBP3Q9UFD9 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC33.02■■■□□ 2.88
RIMBP3Q9UFD9 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
RIMBP3Q9UFD9 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
RIMBP3Q9UFD9 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC33.02■■■□□ 2.88
RIMBP3Q9UFD9 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC33.02■■■□□ 2.88
RIMBP3Q9UFD9 EGLN1P1-201ENST00000531623 762 ntBASIC33.02■■■□□ 2.88
RIMBP3Q9UFD9 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC33.02■■■□□ 2.88
RIMBP3Q9UFD9 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC33.02■■■□□ 2.88
RIMBP3Q9UFD9 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
RIMBP3Q9UFD9 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC33.02■■■□□ 2.88
RIMBP3Q9UFD9 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
RIMBP3Q9UFD9 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC33.02■■■□□ 2.88
RIMBP3Q9UFD9 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC33.01■■■□□ 2.87
RIMBP3Q9UFD9 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
RIMBP3Q9UFD9 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
RIMBP3Q9UFD9 AC139887.4-201ENST00000607877 719 ntBASIC33.01■■■□□ 2.87
RIMBP3Q9UFD9 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC33■■■□□ 2.87
RIMBP3Q9UFD9 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC33■■■□□ 2.87
RIMBP3Q9UFD9 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC33■■■□□ 2.87
RIMBP3Q9UFD9 THRA-202ENST00000394121 2260 ntTSL 2 BASIC33■■■□□ 2.87
RIMBP3Q9UFD9 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC33■■■□□ 2.87
RIMBP3Q9UFD9 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC33■■■□□ 2.87
RIMBP3Q9UFD9 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC33■■■□□ 2.87
RIMBP3Q9UFD9 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC33■■■□□ 2.87
RIMBP3Q9UFD9 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC33■■■□□ 2.87
RIMBP3Q9UFD9 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC33■■■□□ 2.87
RIMBP3Q9UFD9 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC33■■■□□ 2.87
RIMBP3Q9UFD9 CD81-212ENST00000526072 1172 ntTSL 5 BASIC33■■■□□ 2.87
RIMBP3Q9UFD9 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC33■■■□□ 2.87
RIMBP3Q9UFD9 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
RIMBP3Q9UFD9 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC32.99■■■□□ 2.87
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms