Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CPNE7Q9UBL6 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CPNE7Q9UBL6 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CPNE7Q9UBL6 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CPNE7Q9UBL6 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.89■□□□□ 0.77
CPNE7Q9UBL6 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CPNE7Q9UBL6 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.89■□□□□ 0.77
CPNE7Q9UBL6 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
CPNE7Q9UBL6 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.89■□□□□ 0.77
CPNE7Q9UBL6 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.89■□□□□ 0.77
CPNE7Q9UBL6 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.89■□□□□ 0.77
CPNE7Q9UBL6 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.89■□□□□ 0.77
CPNE7Q9UBL6 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.89■□□□□ 0.77
CPNE7Q9UBL6 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.89■□□□□ 0.77
CPNE7Q9UBL6 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CPNE7Q9UBL6 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CPNE7Q9UBL6 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CPNE7Q9UBL6 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CPNE7Q9UBL6 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CPNE7Q9UBL6 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CPNE7Q9UBL6 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CPNE7Q9UBL6 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.88■□□□□ 0.77
CPNE7Q9UBL6 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CPNE7Q9UBL6 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.88■□□□□ 0.77
CPNE7Q9UBL6 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.88■□□□□ 0.77
CPNE7Q9UBL6 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.88■□□□□ 0.77
CPNE7Q9UBL6 HLA-B-256ENST00000639848 1089 ntBASIC19.88■□□□□ 0.77
CPNE7Q9UBL6 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CPNE7Q9UBL6 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
CPNE7Q9UBL6 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CPNE7Q9UBL6 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.87■□□□□ 0.77
CPNE7Q9UBL6 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CPNE7Q9UBL6 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CPNE7Q9UBL6 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.87■□□□□ 0.77
CPNE7Q9UBL6 UNC93B5-201ENST00000530315 699 ntBASIC19.87■□□□□ 0.77
CPNE7Q9UBL6 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.87■□□□□ 0.77
CPNE7Q9UBL6 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CPNE7Q9UBL6 AC060766.5-201ENST00000590539 871 ntBASIC19.87■□□□□ 0.77
CPNE7Q9UBL6 AL356652.1-201ENST00000615962 565 ntBASIC19.87■□□□□ 0.77
CPNE7Q9UBL6 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CPNE7Q9UBL6 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CPNE7Q9UBL6 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CPNE7Q9UBL6 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CPNE7Q9UBL6 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
CPNE7Q9UBL6 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CPNE7Q9UBL6 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CPNE7Q9UBL6 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CPNE7Q9UBL6 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CPNE7Q9UBL6 FEM1AP4-201ENST00000443167 1987 ntBASIC19.86■□□□□ 0.77
CPNE7Q9UBL6 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CPNE7Q9UBL6 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CPNE7Q9UBL6 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CPNE7Q9UBL6 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.86■□□□□ 0.77
CPNE7Q9UBL6 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CPNE7Q9UBL6 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.86■□□□□ 0.77
CPNE7Q9UBL6 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CPNE7Q9UBL6 ESRRAP1-201ENST00000400596 1257 ntBASIC19.86■□□□□ 0.77
CPNE7Q9UBL6 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CPNE7Q9UBL6 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CPNE7Q9UBL6 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CPNE7Q9UBL6 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CPNE7Q9UBL6 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CPNE7Q9UBL6 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CPNE7Q9UBL6 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CPNE7Q9UBL6 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CPNE7Q9UBL6 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CPNE7Q9UBL6 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.85■□□□□ 0.77
CPNE7Q9UBL6 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CPNE7Q9UBL6 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CPNE7Q9UBL6 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CPNE7Q9UBL6 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CPNE7Q9UBL6 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CPNE7Q9UBL6 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CPNE7Q9UBL6 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CPNE7Q9UBL6 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.85■□□□□ 0.77
CPNE7Q9UBL6 C2orf69P4-201ENST00000565394 541 ntBASIC19.85■□□□□ 0.77
CPNE7Q9UBL6 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CPNE7Q9UBL6 ITM2C-210ENST00000620962 501 ntBASIC19.85■□□□□ 0.77
CPNE7Q9UBL6 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CPNE7Q9UBL6 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.85■□□□□ 0.77
CPNE7Q9UBL6 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CPNE7Q9UBL6 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CPNE7Q9UBL6 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.85■□□□□ 0.77
CPNE7Q9UBL6 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CPNE7Q9UBL6 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CPNE7Q9UBL6 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CPNE7Q9UBL6 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.84■□□□□ 0.77
CPNE7Q9UBL6 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CPNE7Q9UBL6 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.84■□□□□ 0.77
CPNE7Q9UBL6 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CPNE7Q9UBL6 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CPNE7Q9UBL6 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CPNE7Q9UBL6 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
CPNE7Q9UBL6 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.84■□□□□ 0.77
CPNE7Q9UBL6 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.84■□□□□ 0.77
CPNE7Q9UBL6 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CPNE7Q9UBL6 AC121338.2-201ENST00000622535 1744 ntBASIC19.84■□□□□ 0.77
CPNE7Q9UBL6 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CPNE7Q9UBL6 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CPNE7Q9UBL6 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms