Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.81■□□□□ 0.6
LRFN1Q9P244 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRFN1Q9P244 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.8■□□□□ 0.6
LRFN1Q9P244 Z98882.1-201ENST00000622160 2253 ntBASIC18.8■□□□□ 0.6
LRFN1Q9P244 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRFN1Q9P244 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRFN1Q9P244 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRFN1Q9P244 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRFN1Q9P244 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
LRFN1Q9P244 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.8■□□□□ 0.6
LRFN1Q9P244 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
LRFN1Q9P244 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRFN1Q9P244 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.8■□□□□ 0.6
LRFN1Q9P244 PGM5P4-201ENST00000421970 445 ntBASIC18.8■□□□□ 0.6
LRFN1Q9P244 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRFN1Q9P244 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
LRFN1Q9P244 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRFN1Q9P244 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRFN1Q9P244 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.79■□□□□ 0.6
LRFN1Q9P244 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRFN1Q9P244 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRFN1Q9P244 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRFN1Q9P244 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.79■□□□□ 0.6
LRFN1Q9P244 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.79■□□□□ 0.6
LRFN1Q9P244 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRFN1Q9P244 AC026366.1-201ENST00000488803 879 ntBASIC18.79■□□□□ 0.6
LRFN1Q9P244 AP003097.1-201ENST00000530657 1135 ntBASIC18.79■□□□□ 0.6
LRFN1Q9P244 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRFN1Q9P244 AC008687.6-201ENST00000596318 630 ntBASIC18.79■□□□□ 0.6
LRFN1Q9P244 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRFN1Q9P244 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.79■□□□□ 0.6
LRFN1Q9P244 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRFN1Q9P244 AC087633.2-202ENST00000565166 1439 ntBASIC18.79■□□□□ 0.6
LRFN1Q9P244 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRFN1Q9P244 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRFN1Q9P244 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
LRFN1Q9P244 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.79■□□□□ 0.6
LRFN1Q9P244 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRFN1Q9P244 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.78■□□□□ 0.6
LRFN1Q9P244 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
LRFN1Q9P244 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.78■□□□□ 0.6
LRFN1Q9P244 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.78■□□□□ 0.6
LRFN1Q9P244 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LRFN1Q9P244 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRFN1Q9P244 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.78■□□□□ 0.6
LRFN1Q9P244 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.78■□□□□ 0.6
LRFN1Q9P244 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRFN1Q9P244 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRFN1Q9P244 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LRFN1Q9P244 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
LRFN1Q9P244 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.78■□□□□ 0.6
LRFN1Q9P244 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.78■□□□□ 0.6
LRFN1Q9P244 AC006058.3-201ENST00000606217 1069 ntBASIC18.78■□□□□ 0.6
LRFN1Q9P244 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRFN1Q9P244 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.78■□□□□ 0.6
LRFN1Q9P244 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRFN1Q9P244 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
LRFN1Q9P244 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
LRFN1Q9P244 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRFN1Q9P244 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRFN1Q9P244 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.77■□□□□ 0.6
LRFN1Q9P244 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRFN1Q9P244 AC092368.3-202ENST00000574180 1591 ntBASIC18.77■□□□□ 0.6
LRFN1Q9P244 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
LRFN1Q9P244 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.77■□□□□ 0.6
LRFN1Q9P244 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRFN1Q9P244 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRFN1Q9P244 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LRFN1Q9P244 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LRFN1Q9P244 PRORSD1P-201ENST00000295112 541 ntBASIC18.77■□□□□ 0.6
LRFN1Q9P244 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRFN1Q9P244 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
LRFN1Q9P244 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.77■□□□□ 0.6
LRFN1Q9P244 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.77■□□□□ 0.6
LRFN1Q9P244 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LRFN1Q9P244 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
LRFN1Q9P244 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRFN1Q9P244 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LRFN1Q9P244 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
LRFN1Q9P244 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRFN1Q9P244 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
LRFN1Q9P244 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LRFN1Q9P244 PNMA6B-201ENST00000538162 1200 ntBASIC18.76■□□□□ 0.59
LRFN1Q9P244 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.76■□□□□ 0.59
LRFN1Q9P244 AC066615.1-201ENST00000640911 628 ntBASIC18.76■□□□□ 0.59
LRFN1Q9P244 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.76■□□□□ 0.59
LRFN1Q9P244 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.76■□□□□ 0.59
LRFN1Q9P244 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRFN1Q9P244 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
LRFN1Q9P244 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRFN1Q9P244 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LRFN1Q9P244 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LRFN1Q9P244 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRFN1Q9P244 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.75■□□□□ 0.59
LRFN1Q9P244 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.75■□□□□ 0.59
LRFN1Q9P244 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRFN1Q9P244 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LRFN1Q9P244 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.75■□□□□ 0.59
LRFN1Q9P244 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRFN1Q9P244 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms