Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NCKIPSDQ9NZQ3 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NCKIPSDQ9NZQ3 LINC01006-201ENST00000333319 2292 ntBASIC20.64■□□□□ 0.89
NCKIPSDQ9NZQ3 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.64■□□□□ 0.89
NCKIPSDQ9NZQ3 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
NCKIPSDQ9NZQ3 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.64■□□□□ 0.89
NCKIPSDQ9NZQ3 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NCKIPSDQ9NZQ3 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.64■□□□□ 0.89
NCKIPSDQ9NZQ3 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
NCKIPSDQ9NZQ3 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.64■□□□□ 0.89
NCKIPSDQ9NZQ3 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.64■□□□□ 0.89
NCKIPSDQ9NZQ3 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.89
NCKIPSDQ9NZQ3 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.64■□□□□ 0.89
NCKIPSDQ9NZQ3 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.64■□□□□ 0.89
NCKIPSDQ9NZQ3 FEM1AP1-201ENST00000431297 1995 ntBASIC20.64■□□□□ 0.89
NCKIPSDQ9NZQ3 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NCKIPSDQ9NZQ3 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.64■□□□□ 0.89
NCKIPSDQ9NZQ3 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NCKIPSDQ9NZQ3 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NCKIPSDQ9NZQ3 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NCKIPSDQ9NZQ3 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
NCKIPSDQ9NZQ3 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.64■□□□□ 0.89
NCKIPSDQ9NZQ3 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NCKIPSDQ9NZQ3 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NCKIPSDQ9NZQ3 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.63■□□□□ 0.89
NCKIPSDQ9NZQ3 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NCKIPSDQ9NZQ3 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
NCKIPSDQ9NZQ3 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.63■□□□□ 0.89
NCKIPSDQ9NZQ3 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
NCKIPSDQ9NZQ3 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.63■□□□□ 0.89
NCKIPSDQ9NZQ3 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.63■□□□□ 0.89
NCKIPSDQ9NZQ3 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.63■□□□□ 0.89
NCKIPSDQ9NZQ3 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
NCKIPSDQ9NZQ3 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.63■□□□□ 0.89
NCKIPSDQ9NZQ3 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.63■□□□□ 0.89
NCKIPSDQ9NZQ3 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.63■□□□□ 0.89
NCKIPSDQ9NZQ3 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.63■□□□□ 0.89
NCKIPSDQ9NZQ3 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.63■□□□□ 0.89
NCKIPSDQ9NZQ3 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
NCKIPSDQ9NZQ3 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NCKIPSDQ9NZQ3 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
NCKIPSDQ9NZQ3 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.62■□□□□ 0.89
NCKIPSDQ9NZQ3 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
NCKIPSDQ9NZQ3 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NCKIPSDQ9NZQ3 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.62■□□□□ 0.89
NCKIPSDQ9NZQ3 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NCKIPSDQ9NZQ3 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NCKIPSDQ9NZQ3 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NCKIPSDQ9NZQ3 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
NCKIPSDQ9NZQ3 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
NCKIPSDQ9NZQ3 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NCKIPSDQ9NZQ3 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NCKIPSDQ9NZQ3 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
NCKIPSDQ9NZQ3 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NCKIPSDQ9NZQ3 CYP2T1P-201ENST00000432607 1285 ntBASIC20.62■□□□□ 0.89
NCKIPSDQ9NZQ3 FAM201B-201ENST00000458407 597 ntBASIC20.62■□□□□ 0.89
NCKIPSDQ9NZQ3 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.62■□□□□ 0.89
NCKIPSDQ9NZQ3 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
NCKIPSDQ9NZQ3 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.62■□□□□ 0.89
NCKIPSDQ9NZQ3 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NCKIPSDQ9NZQ3 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NCKIPSDQ9NZQ3 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
NCKIPSDQ9NZQ3 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NCKIPSDQ9NZQ3 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NCKIPSDQ9NZQ3 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
NCKIPSDQ9NZQ3 AC068338.2-201ENST00000563278 1430 ntBASIC20.61■□□□□ 0.89
NCKIPSDQ9NZQ3 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NCKIPSDQ9NZQ3 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
NCKIPSDQ9NZQ3 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.61■□□□□ 0.89
NCKIPSDQ9NZQ3 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NCKIPSDQ9NZQ3 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NCKIPSDQ9NZQ3 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
NCKIPSDQ9NZQ3 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.61■□□□□ 0.89
NCKIPSDQ9NZQ3 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.61■□□□□ 0.89
NCKIPSDQ9NZQ3 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NCKIPSDQ9NZQ3 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NCKIPSDQ9NZQ3 AL512625.2-201ENST00000417533 625 ntBASIC20.61■□□□□ 0.89
NCKIPSDQ9NZQ3 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
NCKIPSDQ9NZQ3 TSPY20P-201ENST00000450910 630 ntBASIC20.61■□□□□ 0.89
NCKIPSDQ9NZQ3 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.61■□□□□ 0.89
NCKIPSDQ9NZQ3 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
NCKIPSDQ9NZQ3 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.61■□□□□ 0.89
NCKIPSDQ9NZQ3 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NCKIPSDQ9NZQ3 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
NCKIPSDQ9NZQ3 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NCKIPSDQ9NZQ3 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
NCKIPSDQ9NZQ3 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
NCKIPSDQ9NZQ3 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NCKIPSDQ9NZQ3 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NCKIPSDQ9NZQ3 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NCKIPSDQ9NZQ3 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NCKIPSDQ9NZQ3 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.61■□□□□ 0.89
NCKIPSDQ9NZQ3 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NCKIPSDQ9NZQ3 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.6■□□□□ 0.89
NCKIPSDQ9NZQ3 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.6■□□□□ 0.89
NCKIPSDQ9NZQ3 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NCKIPSDQ9NZQ3 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NCKIPSDQ9NZQ3 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NCKIPSDQ9NZQ3 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NCKIPSDQ9NZQ3 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms