Protein–RNA interactions for Protein: Q9NZI2

KCNIP1, Kv channel-interacting protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP1Q9NZI2 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KCNIP1Q9NZI2 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.15■□□□□ 0.34
KCNIP1Q9NZI2 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
KCNIP1Q9NZI2 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KCNIP1Q9NZI2 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
KCNIP1Q9NZI2 AC010141.2-201ENST00000452426 721 ntBASIC17.15■□□□□ 0.34
KCNIP1Q9NZI2 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.15■□□□□ 0.34
KCNIP1Q9NZI2 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KCNIP1Q9NZI2 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
KCNIP1Q9NZI2 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
KCNIP1Q9NZI2 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KCNIP1Q9NZI2 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KCNIP1Q9NZI2 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.14■□□□□ 0.33
KCNIP1Q9NZI2 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
KCNIP1Q9NZI2 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KCNIP1Q9NZI2 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KCNIP1Q9NZI2 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.14■□□□□ 0.33
KCNIP1Q9NZI2 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.14■□□□□ 0.33
KCNIP1Q9NZI2 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KCNIP1Q9NZI2 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
KCNIP1Q9NZI2 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
KCNIP1Q9NZI2 AC123595.1-201ENST00000440769 1046 ntBASIC17.14■□□□□ 0.33
KCNIP1Q9NZI2 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC17.14■□□□□ 0.33
KCNIP1Q9NZI2 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC17.14■□□□□ 0.33
KCNIP1Q9NZI2 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC17.14■□□□□ 0.33
KCNIP1Q9NZI2 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC17.14■□□□□ 0.33
KCNIP1Q9NZI2 AC073314.1-201ENST00000568729 2216 ntBASIC17.14■□□□□ 0.33
KCNIP1Q9NZI2 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.14■□□□□ 0.33
KCNIP1Q9NZI2 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.14■□□□□ 0.33
KCNIP1Q9NZI2 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
KCNIP1Q9NZI2 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KCNIP1Q9NZI2 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
KCNIP1Q9NZI2 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KCNIP1Q9NZI2 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.13■□□□□ 0.33
KCNIP1Q9NZI2 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KCNIP1Q9NZI2 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
KCNIP1Q9NZI2 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KCNIP1Q9NZI2 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
KCNIP1Q9NZI2 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
KCNIP1Q9NZI2 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
KCNIP1Q9NZI2 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KCNIP1Q9NZI2 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KCNIP1Q9NZI2 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KCNIP1Q9NZI2 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KCNIP1Q9NZI2 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
KCNIP1Q9NZI2 MIR638-201ENST00000385237 100 ntBASIC17.13■□□□□ 0.33
KCNIP1Q9NZI2 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.13■□□□□ 0.33
KCNIP1Q9NZI2 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KCNIP1Q9NZI2 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KCNIP1Q9NZI2 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC17.13■□□□□ 0.33
KCNIP1Q9NZI2 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.13■□□□□ 0.33
KCNIP1Q9NZI2 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
KCNIP1Q9NZI2 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KCNIP1Q9NZI2 AC092667.1-201ENST00000434301 2586 ntBASIC17.13■□□□□ 0.33
KCNIP1Q9NZI2 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
KCNIP1Q9NZI2 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KCNIP1Q9NZI2 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KCNIP1Q9NZI2 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
KCNIP1Q9NZI2 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KCNIP1Q9NZI2 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
KCNIP1Q9NZI2 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KCNIP1Q9NZI2 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
KCNIP1Q9NZI2 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.12■□□□□ 0.33
KCNIP1Q9NZI2 AC020907.5-201ENST00000624372 1936 ntBASIC17.12■□□□□ 0.33
KCNIP1Q9NZI2 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KCNIP1Q9NZI2 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KCNIP1Q9NZI2 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.12■□□□□ 0.33
KCNIP1Q9NZI2 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KCNIP1Q9NZI2 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.12■□□□□ 0.33
KCNIP1Q9NZI2 AC104187.1-201ENST00000607510 612 ntBASIC17.12■□□□□ 0.33
KCNIP1Q9NZI2 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.12■□□□□ 0.33
KCNIP1Q9NZI2 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
KCNIP1Q9NZI2 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KCNIP1Q9NZI2 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.12■□□□□ 0.33
KCNIP1Q9NZI2 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
KCNIP1Q9NZI2 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KCNIP1Q9NZI2 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KCNIP1Q9NZI2 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KCNIP1Q9NZI2 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.11■□□□□ 0.33
KCNIP1Q9NZI2 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
KCNIP1Q9NZI2 AC027702.1-201ENST00000563810 1770 ntBASIC17.11■□□□□ 0.33
KCNIP1Q9NZI2 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17.11■□□□□ 0.33
KCNIP1Q9NZI2 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.11■□□□□ 0.33
KCNIP1Q9NZI2 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.11■□□□□ 0.33
KCNIP1Q9NZI2 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.11■□□□□ 0.33
KCNIP1Q9NZI2 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.11■□□□□ 0.33
KCNIP1Q9NZI2 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KCNIP1Q9NZI2 TERF1P2-201ENST00000583350 1212 ntBASIC17.11■□□□□ 0.33
KCNIP1Q9NZI2 AP001160.3-201ENST00000601484 763 ntBASIC17.11■□□□□ 0.33
KCNIP1Q9NZI2 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC17.11■□□□□ 0.33
KCNIP1Q9NZI2 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
KCNIP1Q9NZI2 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KCNIP1Q9NZI2 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KCNIP1Q9NZI2 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KCNIP1Q9NZI2 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.11■□□□□ 0.33
KCNIP1Q9NZI2 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
KCNIP1Q9NZI2 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
KCNIP1Q9NZI2 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.11■□□□□ 0.33
KCNIP1Q9NZI2 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.1■□□□□ 0.33
KCNIP1Q9NZI2 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms