Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HCFC1R1Q9NWW0 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
HCFC1R1Q9NWW0 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HCFC1R1Q9NWW0 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HCFC1R1Q9NWW0 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HCFC1R1Q9NWW0 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HCFC1R1Q9NWW0 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HCFC1R1Q9NWW0 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
HCFC1R1Q9NWW0 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.36■■□□□ 1.01
HCFC1R1Q9NWW0 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
HCFC1R1Q9NWW0 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HCFC1R1Q9NWW0 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HCFC1R1Q9NWW0 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.36■■□□□ 1.01
HCFC1R1Q9NWW0 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.36■■□□□ 1.01
HCFC1R1Q9NWW0 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HCFC1R1Q9NWW0 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HCFC1R1Q9NWW0 MDFI-202ENST00000373050 809 ntTSL 2 BASIC21.36■■□□□ 1.01
HCFC1R1Q9NWW0 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HCFC1R1Q9NWW0 PGM5P4-201ENST00000421970 445 ntBASIC21.36■■□□□ 1.01
HCFC1R1Q9NWW0 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.36■■□□□ 1.01
HCFC1R1Q9NWW0 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC21.36■■□□□ 1.01
HCFC1R1Q9NWW0 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC21.36■■□□□ 1.01
HCFC1R1Q9NWW0 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21.36■■□□□ 1.01
HCFC1R1Q9NWW0 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HCFC1R1Q9NWW0 AC124016.1-201ENST00000609552 612 ntBASIC21.36■■□□□ 1.01
HCFC1R1Q9NWW0 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.36■■□□□ 1.01
HCFC1R1Q9NWW0 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HCFC1R1Q9NWW0 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
HCFC1R1Q9NWW0 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HCFC1R1Q9NWW0 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HCFC1R1Q9NWW0 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
HCFC1R1Q9NWW0 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.35■■□□□ 1.01
HCFC1R1Q9NWW0 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HCFC1R1Q9NWW0 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HCFC1R1Q9NWW0 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
HCFC1R1Q9NWW0 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
HCFC1R1Q9NWW0 GXYLT1P3-201ENST00000453058 1193 ntBASIC21.35■■□□□ 1.01
HCFC1R1Q9NWW0 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.35■■□□□ 1.01
HCFC1R1Q9NWW0 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.35■■□□□ 1.01
HCFC1R1Q9NWW0 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21.35■■□□□ 1.01
HCFC1R1Q9NWW0 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
HCFC1R1Q9NWW0 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
HCFC1R1Q9NWW0 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
HCFC1R1Q9NWW0 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.35■■□□□ 1.01
HCFC1R1Q9NWW0 ECEL1P1-201ENST00000373592 1742 ntBASIC21.35■■□□□ 1.01
HCFC1R1Q9NWW0 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HCFC1R1Q9NWW0 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HCFC1R1Q9NWW0 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.34■■□□□ 1.01
HCFC1R1Q9NWW0 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
HCFC1R1Q9NWW0 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HCFC1R1Q9NWW0 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.34■■□□□ 1.01
HCFC1R1Q9NWW0 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HCFC1R1Q9NWW0 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
HCFC1R1Q9NWW0 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
HCFC1R1Q9NWW0 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HCFC1R1Q9NWW0 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC21.34■■□□□ 1.01
HCFC1R1Q9NWW0 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
HCFC1R1Q9NWW0 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC21.34■■□□□ 1.01
HCFC1R1Q9NWW0 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
HCFC1R1Q9NWW0 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HCFC1R1Q9NWW0 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HCFC1R1Q9NWW0 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HCFC1R1Q9NWW0 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
HCFC1R1Q9NWW0 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HCFC1R1Q9NWW0 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
HCFC1R1Q9NWW0 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HCFC1R1Q9NWW0 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.34■■□□□ 1.01
HCFC1R1Q9NWW0 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
HCFC1R1Q9NWW0 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
HCFC1R1Q9NWW0 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
HCFC1R1Q9NWW0 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
HCFC1R1Q9NWW0 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
HCFC1R1Q9NWW0 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
HCFC1R1Q9NWW0 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
HCFC1R1Q9NWW0 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.33■■□□□ 1.01
HCFC1R1Q9NWW0 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
HCFC1R1Q9NWW0 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
HCFC1R1Q9NWW0 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.33■■□□□ 1.01
HCFC1R1Q9NWW0 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
HCFC1R1Q9NWW0 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
HCFC1R1Q9NWW0 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
HCFC1R1Q9NWW0 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
HCFC1R1Q9NWW0 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
HCFC1R1Q9NWW0 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
HCFC1R1Q9NWW0 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
HCFC1R1Q9NWW0 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.33■■□□□ 1
HCFC1R1Q9NWW0 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.33■■□□□ 1
HCFC1R1Q9NWW0 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
HCFC1R1Q9NWW0 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.32■■□□□ 1
HCFC1R1Q9NWW0 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.32■■□□□ 1
HCFC1R1Q9NWW0 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
HCFC1R1Q9NWW0 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC21.32■■□□□ 1
HCFC1R1Q9NWW0 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
HCFC1R1Q9NWW0 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HCFC1R1Q9NWW0 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
HCFC1R1Q9NWW0 AC239809.2-201ENST00000415381 517 ntBASIC21.32■■□□□ 1
HCFC1R1Q9NWW0 ECEL1P3-201ENST00000427961 737 ntBASIC21.32■■□□□ 1
HCFC1R1Q9NWW0 TSPY7P-201ENST00000431358 1114 ntBASIC21.32■■□□□ 1
HCFC1R1Q9NWW0 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HCFC1R1Q9NWW0 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms