Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 KRT18P6-201ENST00000555540 1265 ntBASIC19.2■□□□□ 0.66
KLHL1Q9NR64 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.2■□□□□ 0.66
KLHL1Q9NR64 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.2■□□□□ 0.66
KLHL1Q9NR64 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
KLHL1Q9NR64 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.2■□□□□ 0.66
KLHL1Q9NR64 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.2■□□□□ 0.66
KLHL1Q9NR64 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KLHL1Q9NR64 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.2■□□□□ 0.66
KLHL1Q9NR64 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KLHL1Q9NR64 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KLHL1Q9NR64 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KLHL1Q9NR64 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.2■□□□□ 0.66
KLHL1Q9NR64 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.2■□□□□ 0.66
KLHL1Q9NR64 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
KLHL1Q9NR64 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.19■□□□□ 0.66
KLHL1Q9NR64 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.19■□□□□ 0.66
KLHL1Q9NR64 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KLHL1Q9NR64 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
KLHL1Q9NR64 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
KLHL1Q9NR64 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KLHL1Q9NR64 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
KLHL1Q9NR64 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.19■□□□□ 0.66
KLHL1Q9NR64 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KLHL1Q9NR64 RBM17P2-201ENST00000616397 1405 ntBASIC19.19■□□□□ 0.66
KLHL1Q9NR64 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
KLHL1Q9NR64 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.19■□□□□ 0.66
KLHL1Q9NR64 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KLHL1Q9NR64 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
KLHL1Q9NR64 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
KLHL1Q9NR64 OR10C1-204ENST00000622521 1039 ntBASIC19.19■□□□□ 0.66
KLHL1Q9NR64 AC133041.1-202ENST00000642053 222 ntBASIC19.19■□□□□ 0.66
KLHL1Q9NR64 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.19■□□□□ 0.66
KLHL1Q9NR64 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
KLHL1Q9NR64 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KLHL1Q9NR64 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KLHL1Q9NR64 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KLHL1Q9NR64 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KLHL1Q9NR64 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KLHL1Q9NR64 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KLHL1Q9NR64 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
KLHL1Q9NR64 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KLHL1Q9NR64 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KLHL1Q9NR64 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KLHL1Q9NR64 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.18■□□□□ 0.66
KLHL1Q9NR64 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.18■□□□□ 0.66
KLHL1Q9NR64 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KLHL1Q9NR64 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
KLHL1Q9NR64 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KLHL1Q9NR64 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KLHL1Q9NR64 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KLHL1Q9NR64 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KLHL1Q9NR64 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.18■□□□□ 0.66
KLHL1Q9NR64 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.18■□□□□ 0.66
KLHL1Q9NR64 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KLHL1Q9NR64 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
KLHL1Q9NR64 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.17■□□□□ 0.66
KLHL1Q9NR64 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KLHL1Q9NR64 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
KLHL1Q9NR64 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.17■□□□□ 0.66
KLHL1Q9NR64 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KLHL1Q9NR64 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
KLHL1Q9NR64 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KLHL1Q9NR64 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KLHL1Q9NR64 MIPEPP3-201ENST00000412105 444 ntBASIC19.17■□□□□ 0.66
KLHL1Q9NR64 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KLHL1Q9NR64 TSPY20P-201ENST00000450910 630 ntBASIC19.17■□□□□ 0.66
KLHL1Q9NR64 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.17■□□□□ 0.66
KLHL1Q9NR64 MIR4758-201ENST00000577688 71 ntBASIC19.17■□□□□ 0.66
KLHL1Q9NR64 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.17■□□□□ 0.66
KLHL1Q9NR64 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KLHL1Q9NR64 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
KLHL1Q9NR64 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
KLHL1Q9NR64 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.17■□□□□ 0.66
KLHL1Q9NR64 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KLHL1Q9NR64 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.17■□□□□ 0.66
KLHL1Q9NR64 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.17■□□□□ 0.66
KLHL1Q9NR64 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KLHL1Q9NR64 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.16■□□□□ 0.66
KLHL1Q9NR64 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
KLHL1Q9NR64 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KLHL1Q9NR64 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KLHL1Q9NR64 FEM1AP4-201ENST00000443167 1987 ntBASIC19.16■□□□□ 0.66
KLHL1Q9NR64 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
KLHL1Q9NR64 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KLHL1Q9NR64 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KLHL1Q9NR64 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
KLHL1Q9NR64 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
KLHL1Q9NR64 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
KLHL1Q9NR64 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.16■□□□□ 0.66
KLHL1Q9NR64 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KLHL1Q9NR64 AL591742.1-201ENST00000604433 565 ntBASIC19.16■□□□□ 0.66
KLHL1Q9NR64 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
KLHL1Q9NR64 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KLHL1Q9NR64 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KLHL1Q9NR64 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KLHL1Q9NR64 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
KLHL1Q9NR64 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.16■□□□□ 0.66
KLHL1Q9NR64 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.16■□□□□ 0.66
KLHL1Q9NR64 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
KLHL1Q9NR64 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms