Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.41■□□□□ 0.7
SLC52A3Q9NQ40 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SLC52A3Q9NQ40 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.41■□□□□ 0.7
SLC52A3Q9NQ40 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.41■□□□□ 0.7
SLC52A3Q9NQ40 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.41■□□□□ 0.7
SLC52A3Q9NQ40 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.41■□□□□ 0.7
SLC52A3Q9NQ40 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.41■□□□□ 0.7
SLC52A3Q9NQ40 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SLC52A3Q9NQ40 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC52A3Q9NQ40 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC52A3Q9NQ40 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.4■□□□□ 0.7
SLC52A3Q9NQ40 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.4■□□□□ 0.7
SLC52A3Q9NQ40 RNF165-205ENST00000588679 2904 ntBASIC19.4■□□□□ 0.7
SLC52A3Q9NQ40 AC116050.2-201ENST00000612102 1779 ntBASIC19.4■□□□□ 0.7
SLC52A3Q9NQ40 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SLC52A3Q9NQ40 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SLC52A3Q9NQ40 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.4■□□□□ 0.7
SLC52A3Q9NQ40 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC52A3Q9NQ40 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.4■□□□□ 0.7
SLC52A3Q9NQ40 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.4■□□□□ 0.7
SLC52A3Q9NQ40 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SLC52A3Q9NQ40 AC110285.6-201ENST00000617652 491 ntBASIC19.4■□□□□ 0.7
SLC52A3Q9NQ40 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.4■□□□□ 0.7
SLC52A3Q9NQ40 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC52A3Q9NQ40 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.4■□□□□ 0.7
SLC52A3Q9NQ40 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC52A3Q9NQ40 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC52A3Q9NQ40 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SLC52A3Q9NQ40 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.4■□□□□ 0.7
SLC52A3Q9NQ40 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC52A3Q9NQ40 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
SLC52A3Q9NQ40 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.39■□□□□ 0.7
SLC52A3Q9NQ40 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SLC52A3Q9NQ40 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.39■□□□□ 0.69
SLC52A3Q9NQ40 AC245052.3-201ENST00000450182 901 ntBASIC19.39■□□□□ 0.69
SLC52A3Q9NQ40 SUDS3P1-201ENST00000505831 966 ntBASIC19.39■□□□□ 0.69
SLC52A3Q9NQ40 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.39■□□□□ 0.69
SLC52A3Q9NQ40 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.39■□□□□ 0.69
SLC52A3Q9NQ40 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.39■□□□□ 0.69
SLC52A3Q9NQ40 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC52A3Q9NQ40 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SLC52A3Q9NQ40 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SLC52A3Q9NQ40 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SLC52A3Q9NQ40 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.39■□□□□ 0.69
SLC52A3Q9NQ40 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.39■□□□□ 0.69
SLC52A3Q9NQ40 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC52A3Q9NQ40 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC52A3Q9NQ40 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC52A3Q9NQ40 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC52A3Q9NQ40 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SLC52A3Q9NQ40 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SLC52A3Q9NQ40 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC52A3Q9NQ40 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC52A3Q9NQ40 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.38■□□□□ 0.69
SLC52A3Q9NQ40 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC52A3Q9NQ40 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC52A3Q9NQ40 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.38■□□□□ 0.69
SLC52A3Q9NQ40 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SLC52A3Q9NQ40 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SLC52A3Q9NQ40 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC52A3Q9NQ40 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC52A3Q9NQ40 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.38■□□□□ 0.69
SLC52A3Q9NQ40 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SLC52A3Q9NQ40 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC52A3Q9NQ40 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC52A3Q9NQ40 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.38■□□□□ 0.69
SLC52A3Q9NQ40 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLC52A3Q9NQ40 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SLC52A3Q9NQ40 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC52A3Q9NQ40 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.37■□□□□ 0.69
SLC52A3Q9NQ40 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC52A3Q9NQ40 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.37■□□□□ 0.69
SLC52A3Q9NQ40 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC52A3Q9NQ40 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLC52A3Q9NQ40 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC52A3Q9NQ40 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.37■□□□□ 0.69
SLC52A3Q9NQ40 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLC52A3Q9NQ40 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC52A3Q9NQ40 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.37■□□□□ 0.69
SLC52A3Q9NQ40 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC52A3Q9NQ40 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SLC52A3Q9NQ40 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC52A3Q9NQ40 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.37■□□□□ 0.69
SLC52A3Q9NQ40 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.37■□□□□ 0.69
SLC52A3Q9NQ40 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.37■□□□□ 0.69
SLC52A3Q9NQ40 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.37■□□□□ 0.69
SLC52A3Q9NQ40 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.37■□□□□ 0.69
SLC52A3Q9NQ40 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.37■□□□□ 0.69
SLC52A3Q9NQ40 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.37■□□□□ 0.69
SLC52A3Q9NQ40 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLC52A3Q9NQ40 AC079140.4-201ENST00000507448 529 ntBASIC19.37■□□□□ 0.69
SLC52A3Q9NQ40 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.37■□□□□ 0.69
SLC52A3Q9NQ40 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.37■□□□□ 0.69
SLC52A3Q9NQ40 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC52A3Q9NQ40 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC52A3Q9NQ40 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLC52A3Q9NQ40 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
SLC52A3Q9NQ40 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC52A3Q9NQ40 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC52A3Q9NQ40 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms