Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.3■□□□□ 0.68
CHD8Q9HCK8 RN7SL510P-201ENST00000581311 263 ntBASIC19.3■□□□□ 0.68
CHD8Q9HCK8 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHD8Q9HCK8 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHD8Q9HCK8 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.3■□□□□ 0.68
CHD8Q9HCK8 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CHD8Q9HCK8 AC093458.2-201ENST00000623150 629 ntBASIC19.3■□□□□ 0.68
CHD8Q9HCK8 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CHD8Q9HCK8 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CHD8Q9HCK8 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHD8Q9HCK8 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CHD8Q9HCK8 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHD8Q9HCK8 KRT8P45-201ENST00000414328 1447 ntBASIC19.29■□□□□ 0.68
CHD8Q9HCK8 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.29■□□□□ 0.68
CHD8Q9HCK8 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CHD8Q9HCK8 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHD8Q9HCK8 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHD8Q9HCK8 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHD8Q9HCK8 AC245052.3-201ENST00000450182 901 ntBASIC19.29■□□□□ 0.68
CHD8Q9HCK8 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.29■□□□□ 0.68
CHD8Q9HCK8 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.29■□□□□ 0.68
CHD8Q9HCK8 AC124283.5-201ENST00000624661 1809 ntBASIC19.29■□□□□ 0.68
CHD8Q9HCK8 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CHD8Q9HCK8 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.29■□□□□ 0.68
CHD8Q9HCK8 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.29■□□□□ 0.68
CHD8Q9HCK8 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHD8Q9HCK8 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.29■□□□□ 0.68
CHD8Q9HCK8 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CHD8Q9HCK8 YBX1P2-201ENST00000489612 999 ntBASIC19.29■□□□□ 0.68
CHD8Q9HCK8 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.29■□□□□ 0.68
CHD8Q9HCK8 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHD8Q9HCK8 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.29■□□□□ 0.68
CHD8Q9HCK8 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHD8Q9HCK8 AL139125.2-201ENST00000623134 1869 ntBASIC19.28■□□□□ 0.68
CHD8Q9HCK8 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHD8Q9HCK8 AC010203.1-204ENST00000548782 407 ntBASIC19.28■□□□□ 0.68
CHD8Q9HCK8 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.28■□□□□ 0.68
CHD8Q9HCK8 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.28■□□□□ 0.68
CHD8Q9HCK8 AC139887.4-201ENST00000607877 719 ntBASIC19.28■□□□□ 0.68
CHD8Q9HCK8 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.28■□□□□ 0.68
CHD8Q9HCK8 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHD8Q9HCK8 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.28■□□□□ 0.68
CHD8Q9HCK8 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.27■□□□□ 0.68
CHD8Q9HCK8 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHD8Q9HCK8 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHD8Q9HCK8 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHD8Q9HCK8 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHD8Q9HCK8 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHD8Q9HCK8 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHD8Q9HCK8 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.27■□□□□ 0.68
CHD8Q9HCK8 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CHD8Q9HCK8 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
CHD8Q9HCK8 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CHD8Q9HCK8 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CHD8Q9HCK8 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
CHD8Q9HCK8 AC092647.4-201ENST00000457211 535 ntBASIC19.27■□□□□ 0.67
CHD8Q9HCK8 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC19.27■□□□□ 0.67
CHD8Q9HCK8 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.26■□□□□ 0.67
CHD8Q9HCK8 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHD8Q9HCK8 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.26■□□□□ 0.67
CHD8Q9HCK8 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.26■□□□□ 0.67
CHD8Q9HCK8 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.26■□□□□ 0.67
CHD8Q9HCK8 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
CHD8Q9HCK8 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.26■□□□□ 0.67
CHD8Q9HCK8 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.26■□□□□ 0.67
CHD8Q9HCK8 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHD8Q9HCK8 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CHD8Q9HCK8 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHD8Q9HCK8 CR769767.2-201ENST00000622735 460 ntBASIC19.26■□□□□ 0.67
CHD8Q9HCK8 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHD8Q9HCK8 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHD8Q9HCK8 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHD8Q9HCK8 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHD8Q9HCK8 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.25■□□□□ 0.67
CHD8Q9HCK8 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CHD8Q9HCK8 AC138932.3-201ENST00000567634 1902 ntBASIC19.25■□□□□ 0.67
CHD8Q9HCK8 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CHD8Q9HCK8 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHD8Q9HCK8 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHD8Q9HCK8 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.25■□□□□ 0.67
CHD8Q9HCK8 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHD8Q9HCK8 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHD8Q9HCK8 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHD8Q9HCK8 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.25■□□□□ 0.67
CHD8Q9HCK8 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.25■□□□□ 0.67
CHD8Q9HCK8 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHD8Q9HCK8 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.25■□□□□ 0.67
CHD8Q9HCK8 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.25■□□□□ 0.67
CHD8Q9HCK8 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHD8Q9HCK8 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHD8Q9HCK8 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
CHD8Q9HCK8 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CHD8Q9HCK8 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.24■□□□□ 0.67
CHD8Q9HCK8 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.24■□□□□ 0.67
CHD8Q9HCK8 AP002982.1-201ENST00000492365 877 ntBASIC19.24■□□□□ 0.67
CHD8Q9HCK8 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.24■□□□□ 0.67
CHD8Q9HCK8 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.24■□□□□ 0.67
CHD8Q9HCK8 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CHD8Q9HCK8 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHD8Q9HCK8 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms