Protein–RNA interactions for Protein: Q9HBW1

LRRC4, Leucine-rich repeat-containing protein 4, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC4Q9HBW1 AC027702.1-201ENST00000563810 1770 ntBASIC21.58■■□□□ 1.04
LRRC4Q9HBW1 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
LRRC4Q9HBW1 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
LRRC4Q9HBW1 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LRRC4Q9HBW1 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
LRRC4Q9HBW1 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.57■■□□□ 1.04
LRRC4Q9HBW1 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
LRRC4Q9HBW1 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
LRRC4Q9HBW1 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.57■■□□□ 1.04
LRRC4Q9HBW1 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
LRRC4Q9HBW1 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
LRRC4Q9HBW1 BX276092.2-201ENST00000417668 665 ntBASIC21.57■■□□□ 1.04
LRRC4Q9HBW1 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.57■■□□□ 1.04
LRRC4Q9HBW1 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
LRRC4Q9HBW1 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.57■■□□□ 1.04
LRRC4Q9HBW1 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
LRRC4Q9HBW1 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.57■■□□□ 1.04
LRRC4Q9HBW1 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
LRRC4Q9HBW1 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.57■■□□□ 1.04
LRRC4Q9HBW1 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
LRRC4Q9HBW1 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
LRRC4Q9HBW1 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.56■■□□□ 1.04
LRRC4Q9HBW1 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
LRRC4Q9HBW1 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LRRC4Q9HBW1 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
LRRC4Q9HBW1 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LRRC4Q9HBW1 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.56■■□□□ 1.04
LRRC4Q9HBW1 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
LRRC4Q9HBW1 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
LRRC4Q9HBW1 KRT18P68-201ENST00000392293 1000 ntBASIC21.56■■□□□ 1.04
LRRC4Q9HBW1 MIPEPP3-201ENST00000412105 444 ntBASIC21.56■■□□□ 1.04
LRRC4Q9HBW1 PGM5P4-201ENST00000421970 445 ntBASIC21.56■■□□□ 1.04
LRRC4Q9HBW1 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.56■■□□□ 1.04
LRRC4Q9HBW1 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.56■■□□□ 1.04
LRRC4Q9HBW1 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.56■■□□□ 1.04
LRRC4Q9HBW1 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.56■■□□□ 1.04
LRRC4Q9HBW1 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LRRC4Q9HBW1 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRRC4Q9HBW1 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRRC4Q9HBW1 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.55■■□□□ 1.04
LRRC4Q9HBW1 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRRC4Q9HBW1 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRRC4Q9HBW1 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRRC4Q9HBW1 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
LRRC4Q9HBW1 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LRRC4Q9HBW1 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRRC4Q9HBW1 AL355802.2-201ENST00000402069 882 ntBASIC21.55■■□□□ 1.04
LRRC4Q9HBW1 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.55■■□□□ 1.04
LRRC4Q9HBW1 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.55■■□□□ 1.04
LRRC4Q9HBW1 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
LRRC4Q9HBW1 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
LRRC4Q9HBW1 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
LRRC4Q9HBW1 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.55■■□□□ 1.04
LRRC4Q9HBW1 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.55■■□□□ 1.04
LRRC4Q9HBW1 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRRC4Q9HBW1 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRRC4Q9HBW1 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRRC4Q9HBW1 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.55■■□□□ 1.04
LRRC4Q9HBW1 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LRRC4Q9HBW1 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.55■■□□□ 1.04
LRRC4Q9HBW1 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRRC4Q9HBW1 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.55■■□□□ 1.04
LRRC4Q9HBW1 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRRC4Q9HBW1 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
LRRC4Q9HBW1 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
LRRC4Q9HBW1 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.54■■□□□ 1.04
LRRC4Q9HBW1 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRRC4Q9HBW1 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.54■■□□□ 1.04
LRRC4Q9HBW1 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
LRRC4Q9HBW1 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.54■■□□□ 1.04
LRRC4Q9HBW1 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRRC4Q9HBW1 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRRC4Q9HBW1 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LRRC4Q9HBW1 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRRC4Q9HBW1 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRRC4Q9HBW1 LSM12P1-201ENST00000411836 588 ntBASIC21.54■■□□□ 1.04
LRRC4Q9HBW1 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LRRC4Q9HBW1 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.54■■□□□ 1.04
LRRC4Q9HBW1 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.54■■□□□ 1.04
LRRC4Q9HBW1 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LRRC4Q9HBW1 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.54■■□□□ 1.04
LRRC4Q9HBW1 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.54■■□□□ 1.04
LRRC4Q9HBW1 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRRC4Q9HBW1 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.54■■□□□ 1.04
LRRC4Q9HBW1 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
LRRC4Q9HBW1 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LRRC4Q9HBW1 AC087633.2-202ENST00000565166 1439 ntBASIC21.54■■□□□ 1.04
LRRC4Q9HBW1 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LRRC4Q9HBW1 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRRC4Q9HBW1 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRRC4Q9HBW1 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRRC4Q9HBW1 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRRC4Q9HBW1 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.53■■□□□ 1.04
LRRC4Q9HBW1 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRRC4Q9HBW1 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.53■■□□□ 1.04
LRRC4Q9HBW1 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRRC4Q9HBW1 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.53■■□□□ 1.04
LRRC4Q9HBW1 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.53■■□□□ 1.04
LRRC4Q9HBW1 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRRC4Q9HBW1 AL589743.5-201ENST00000616611 1050 ntBASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms