Protein–RNA interactions for Protein: Q9H9S0

NANOG, Homeobox protein NANOG, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGQ9H9S0 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NANOGQ9H9S0 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
NANOGQ9H9S0 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.39■□□□□ 0.69
NANOGQ9H9S0 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NANOGQ9H9S0 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.39■□□□□ 0.69
NANOGQ9H9S0 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.39■□□□□ 0.69
NANOGQ9H9S0 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NANOGQ9H9S0 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
NANOGQ9H9S0 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NANOGQ9H9S0 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NANOGQ9H9S0 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NANOGQ9H9S0 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NANOGQ9H9S0 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NANOGQ9H9S0 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NANOGQ9H9S0 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.38■□□□□ 0.69
NANOGQ9H9S0 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NANOGQ9H9S0 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NANOGQ9H9S0 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NANOGQ9H9S0 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NANOGQ9H9S0 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.38■□□□□ 0.69
NANOGQ9H9S0 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
NANOGQ9H9S0 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.38■□□□□ 0.69
NANOGQ9H9S0 AC087289.5-201ENST00000586076 3175 ntBASIC19.38■□□□□ 0.69
NANOGQ9H9S0 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.38■□□□□ 0.69
NANOGQ9H9S0 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NANOGQ9H9S0 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
NANOGQ9H9S0 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.37■□□□□ 0.69
NANOGQ9H9S0 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.37■□□□□ 0.69
NANOGQ9H9S0 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.37■□□□□ 0.69
NANOGQ9H9S0 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NANOGQ9H9S0 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NANOGQ9H9S0 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.37■□□□□ 0.69
NANOGQ9H9S0 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NANOGQ9H9S0 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.37■□□□□ 0.69
NANOGQ9H9S0 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NANOGQ9H9S0 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
NANOGQ9H9S0 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
NANOGQ9H9S0 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NANOGQ9H9S0 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.37■□□□□ 0.69
NANOGQ9H9S0 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NANOGQ9H9S0 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
NANOGQ9H9S0 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NANOGQ9H9S0 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.37■□□□□ 0.69
NANOGQ9H9S0 AC027682.1-201ENST00000562846 899 ntBASIC19.37■□□□□ 0.69
NANOGQ9H9S0 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.37■□□□□ 0.69
NANOGQ9H9S0 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.37■□□□□ 0.69
NANOGQ9H9S0 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NANOGQ9H9S0 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NANOGQ9H9S0 SMG8-203ENST00000578922 2178 ntBASIC19.37■□□□□ 0.69
NANOGQ9H9S0 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.37■□□□□ 0.69
NANOGQ9H9S0 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
NANOGQ9H9S0 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NANOGQ9H9S0 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NANOGQ9H9S0 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NANOGQ9H9S0 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NANOGQ9H9S0 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.36■□□□□ 0.69
NANOGQ9H9S0 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NANOGQ9H9S0 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
NANOGQ9H9S0 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
NANOGQ9H9S0 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NANOGQ9H9S0 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.36■□□□□ 0.69
NANOGQ9H9S0 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NANOGQ9H9S0 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
NANOGQ9H9S0 RARRES2P11-201ENST00000635158 484 ntBASIC19.36■□□□□ 0.69
NANOGQ9H9S0 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NANOGQ9H9S0 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
NANOGQ9H9S0 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NANOGQ9H9S0 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NANOGQ9H9S0 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
NANOGQ9H9S0 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NANOGQ9H9S0 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
NANOGQ9H9S0 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NANOGQ9H9S0 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NANOGQ9H9S0 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.35■□□□□ 0.69
NANOGQ9H9S0 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NANOGQ9H9S0 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NANOGQ9H9S0 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.35■□□□□ 0.69
NANOGQ9H9S0 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
NANOGQ9H9S0 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NANOGQ9H9S0 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NANOGQ9H9S0 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
NANOGQ9H9S0 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NANOGQ9H9S0 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NANOGQ9H9S0 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NANOGQ9H9S0 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NANOGQ9H9S0 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
NANOGQ9H9S0 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NANOGQ9H9S0 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NANOGQ9H9S0 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.35■□□□□ 0.69
NANOGQ9H9S0 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NANOGQ9H9S0 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
NANOGQ9H9S0 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.35■□□□□ 0.69
NANOGQ9H9S0 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
NANOGQ9H9S0 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.35■□□□□ 0.69
NANOGQ9H9S0 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NANOGQ9H9S0 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.35■□□□□ 0.69
NANOGQ9H9S0 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
NANOGQ9H9S0 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.35■□□□□ 0.69
NANOGQ9H9S0 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NANOGQ9H9S0 AC125437.2-201ENST00000625180 2167 ntBASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms