Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
BRD9Q9H8M2 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
BRD9Q9H8M2 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
BRD9Q9H8M2 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
BRD9Q9H8M2 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.19■□□□□ 0.98
BRD9Q9H8M2 ECEL1P3-201ENST00000427961 737 ntBASIC21.19■□□□□ 0.98
BRD9Q9H8M2 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
BRD9Q9H8M2 C2orf69P4-201ENST00000565394 541 ntBASIC21.19■□□□□ 0.98
BRD9Q9H8M2 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
BRD9Q9H8M2 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
BRD9Q9H8M2 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
BRD9Q9H8M2 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.19■□□□□ 0.98
BRD9Q9H8M2 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
BRD9Q9H8M2 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
BRD9Q9H8M2 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
BRD9Q9H8M2 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
BRD9Q9H8M2 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
BRD9Q9H8M2 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
BRD9Q9H8M2 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
BRD9Q9H8M2 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
BRD9Q9H8M2 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
BRD9Q9H8M2 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
BRD9Q9H8M2 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
BRD9Q9H8M2 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
BRD9Q9H8M2 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
BRD9Q9H8M2 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.18■□□□□ 0.98
BRD9Q9H8M2 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
BRD9Q9H8M2 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
BRD9Q9H8M2 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.18■□□□□ 0.98
BRD9Q9H8M2 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
BRD9Q9H8M2 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.18■□□□□ 0.98
BRD9Q9H8M2 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
BRD9Q9H8M2 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.18■□□□□ 0.98
BRD9Q9H8M2 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
BRD9Q9H8M2 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
BRD9Q9H8M2 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
BRD9Q9H8M2 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.17■□□□□ 0.98
BRD9Q9H8M2 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
BRD9Q9H8M2 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC21.17■□□□□ 0.98
BRD9Q9H8M2 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
BRD9Q9H8M2 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
BRD9Q9H8M2 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
BRD9Q9H8M2 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
BRD9Q9H8M2 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.17■□□□□ 0.98
BRD9Q9H8M2 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.17■□□□□ 0.98
BRD9Q9H8M2 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
BRD9Q9H8M2 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
BRD9Q9H8M2 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
BRD9Q9H8M2 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
BRD9Q9H8M2 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
BRD9Q9H8M2 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
BRD9Q9H8M2 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
BRD9Q9H8M2 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
BRD9Q9H8M2 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
BRD9Q9H8M2 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.16■□□□□ 0.98
BRD9Q9H8M2 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
BRD9Q9H8M2 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
BRD9Q9H8M2 MDFI-202ENST00000373050 809 ntTSL 2 BASIC21.16■□□□□ 0.98
BRD9Q9H8M2 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
BRD9Q9H8M2 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC21.16■□□□□ 0.98
BRD9Q9H8M2 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
BRD9Q9H8M2 REXO1L12P-201ENST00000622156 912 ntBASIC21.16■□□□□ 0.98
BRD9Q9H8M2 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.16■□□□□ 0.98
BRD9Q9H8M2 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
BRD9Q9H8M2 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.15■□□□□ 0.98
BRD9Q9H8M2 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
BRD9Q9H8M2 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
BRD9Q9H8M2 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
BRD9Q9H8M2 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
BRD9Q9H8M2 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
BRD9Q9H8M2 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
BRD9Q9H8M2 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
BRD9Q9H8M2 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
BRD9Q9H8M2 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
BRD9Q9H8M2 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
BRD9Q9H8M2 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.15■□□□□ 0.98
BRD9Q9H8M2 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
BRD9Q9H8M2 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
BRD9Q9H8M2 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21.15■□□□□ 0.98
BRD9Q9H8M2 KLF2-202ENST00000592003 564 ntTSL 3 BASIC21.15■□□□□ 0.98
BRD9Q9H8M2 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
BRD9Q9H8M2 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
BRD9Q9H8M2 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.15■□□□□ 0.98
BRD9Q9H8M2 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
BRD9Q9H8M2 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
BRD9Q9H8M2 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
BRD9Q9H8M2 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.14■□□□□ 0.98
BRD9Q9H8M2 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
BRD9Q9H8M2 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
BRD9Q9H8M2 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
BRD9Q9H8M2 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
BRD9Q9H8M2 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
BRD9Q9H8M2 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
BRD9Q9H8M2 AC079834.2-201ENST00000609776 1949 ntBASIC21.14■□□□□ 0.98
BRD9Q9H8M2 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
BRD9Q9H8M2 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
BRD9Q9H8M2 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
BRD9Q9H8M2 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
BRD9Q9H8M2 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
BRD9Q9H8M2 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms