Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CHMP4BQ9H444 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC25.81■■□□□ 1.72
CHMP4BQ9H444 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CHMP4BQ9H444 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC25.8■■□□□ 1.72
CHMP4BQ9H444 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
CHMP4BQ9H444 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
CHMP4BQ9H444 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC25.8■■□□□ 1.72
CHMP4BQ9H444 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC25.8■■□□□ 1.72
CHMP4BQ9H444 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC25.8■■□□□ 1.72
CHMP4BQ9H444 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CHMP4BQ9H444 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CHMP4BQ9H444 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CHMP4BQ9H444 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CHMP4BQ9H444 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CHMP4BQ9H444 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CHMP4BQ9H444 GAS2L1P2-201ENST00000436355 1356 ntBASIC25.8■■□□□ 1.72
CHMP4BQ9H444 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CHMP4BQ9H444 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CHMP4BQ9H444 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC25.79■■□□□ 1.72
CHMP4BQ9H444 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
CHMP4BQ9H444 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
CHMP4BQ9H444 BMP1-204ENST00000397814 836 ntTSL 4 BASIC25.79■■□□□ 1.72
CHMP4BQ9H444 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC25.79■■□□□ 1.72
CHMP4BQ9H444 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC25.79■■□□□ 1.72
CHMP4BQ9H444 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC25.79■■□□□ 1.72
CHMP4BQ9H444 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC25.79■■□□□ 1.72
CHMP4BQ9H444 ANKRD20A6P-201ENST00000618763 204 ntBASIC25.79■■□□□ 1.72
CHMP4BQ9H444 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC25.79■■□□□ 1.72
CHMP4BQ9H444 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CHMP4BQ9H444 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC25.79■■□□□ 1.72
CHMP4BQ9H444 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
CHMP4BQ9H444 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
CHMP4BQ9H444 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
CHMP4BQ9H444 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
CHMP4BQ9H444 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC25.78■■□□□ 1.72
CHMP4BQ9H444 AL162430.1-201ENST00000480705 870 ntBASIC25.78■■□□□ 1.72
CHMP4BQ9H444 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC25.78■■□□□ 1.72
CHMP4BQ9H444 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC25.78■■□□□ 1.72
CHMP4BQ9H444 MFSD11-216ENST00000590393 1141 ntBASIC25.78■■□□□ 1.72
CHMP4BQ9H444 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
CHMP4BQ9H444 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC25.78■■□□□ 1.72
CHMP4BQ9H444 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC25.78■■□□□ 1.72
CHMP4BQ9H444 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC25.78■■□□□ 1.72
CHMP4BQ9H444 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
CHMP4BQ9H444 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC25.78■■□□□ 1.72
CHMP4BQ9H444 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
CHMP4BQ9H444 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CHMP4BQ9H444 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC25.77■■□□□ 1.72
CHMP4BQ9H444 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
CHMP4BQ9H444 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC25.77■■□□□ 1.72
CHMP4BQ9H444 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CHMP4BQ9H444 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CHMP4BQ9H444 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CHMP4BQ9H444 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC25.77■■□□□ 1.72
CHMP4BQ9H444 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC25.77■■□□□ 1.72
CHMP4BQ9H444 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
CHMP4BQ9H444 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CHMP4BQ9H444 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC25.77■■□□□ 1.72
CHMP4BQ9H444 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CHMP4BQ9H444 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC25.76■■□□□ 1.71
CHMP4BQ9H444 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC25.76■■□□□ 1.71
CHMP4BQ9H444 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
CHMP4BQ9H444 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
CHMP4BQ9H444 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
CHMP4BQ9H444 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
CHMP4BQ9H444 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC25.76■■□□□ 1.71
CHMP4BQ9H444 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC25.76■■□□□ 1.71
CHMP4BQ9H444 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
CHMP4BQ9H444 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC25.76■■□□□ 1.71
CHMP4BQ9H444 KRT8P36-201ENST00000489121 1440 ntBASIC25.76■■□□□ 1.71
CHMP4BQ9H444 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC25.76■■□□□ 1.71
CHMP4BQ9H444 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC25.76■■□□□ 1.71
CHMP4BQ9H444 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CHMP4BQ9H444 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC25.76■■□□□ 1.71
CHMP4BQ9H444 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CHMP4BQ9H444 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CHMP4BQ9H444 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC25.76■■□□□ 1.71
CHMP4BQ9H444 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CHMP4BQ9H444 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC25.76■■□□□ 1.71
CHMP4BQ9H444 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
CHMP4BQ9H444 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
CHMP4BQ9H444 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CHMP4BQ9H444 AL121603.2-201ENST00000557373 2117 ntBASIC25.75■■□□□ 1.71
CHMP4BQ9H444 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CHMP4BQ9H444 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC25.75■■□□□ 1.71
CHMP4BQ9H444 VMO1-204ENST00000441199 741 ntTSL 2 BASIC25.75■■□□□ 1.71
CHMP4BQ9H444 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CHMP4BQ9H444 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
CHMP4BQ9H444 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CHMP4BQ9H444 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC25.75■■□□□ 1.71
CHMP4BQ9H444 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CHMP4BQ9H444 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC25.74■■□□□ 1.71
CHMP4BQ9H444 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CHMP4BQ9H444 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC25.74■■□□□ 1.71
CHMP4BQ9H444 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC25.74■■□□□ 1.71
CHMP4BQ9H444 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
CHMP4BQ9H444 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CHMP4BQ9H444 ME3-201ENST00000323418 1068 ntTSL 5 BASIC25.74■■□□□ 1.71
CHMP4BQ9H444 UQCRFS1P1-201ENST00000435169 820 ntBASIC25.74■■□□□ 1.71
CHMP4BQ9H444 BID-214ENST00000617586 542 ntTSL 5 BASIC25.74■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms