Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.29■□□□□ 0.84
TRIM4Q9C037 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM4Q9C037 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM4Q9C037 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM4Q9C037 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.29■□□□□ 0.84
TRIM4Q9C037 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
TRIM4Q9C037 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM4Q9C037 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM4Q9C037 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM4Q9C037 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.29■□□□□ 0.84
TRIM4Q9C037 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.28■□□□□ 0.84
TRIM4Q9C037 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM4Q9C037 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
TRIM4Q9C037 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
TRIM4Q9C037 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM4Q9C037 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.28■□□□□ 0.84
TRIM4Q9C037 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM4Q9C037 FAM201B-201ENST00000458407 597 ntBASIC20.28■□□□□ 0.84
TRIM4Q9C037 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.28■□□□□ 0.84
TRIM4Q9C037 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM4Q9C037 AC068587.7-201ENST00000641602 218 ntBASIC20.28■□□□□ 0.84
TRIM4Q9C037 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.28■□□□□ 0.84
TRIM4Q9C037 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.28■□□□□ 0.84
TRIM4Q9C037 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM4Q9C037 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM4Q9C037 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM4Q9C037 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM4Q9C037 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM4Q9C037 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM4Q9C037 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
TRIM4Q9C037 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.27■□□□□ 0.84
TRIM4Q9C037 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.27■□□□□ 0.84
TRIM4Q9C037 LINC01006-201ENST00000333319 2292 ntBASIC20.27■□□□□ 0.84
TRIM4Q9C037 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.27■□□□□ 0.84
TRIM4Q9C037 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.27■□□□□ 0.84
TRIM4Q9C037 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM4Q9C037 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.27■□□□□ 0.84
TRIM4Q9C037 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.27■□□□□ 0.84
TRIM4Q9C037 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.27■□□□□ 0.84
TRIM4Q9C037 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.27■□□□□ 0.84
TRIM4Q9C037 AC105233.4-201ENST00000642045 216 ntBASIC20.27■□□□□ 0.84
TRIM4Q9C037 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TRIM4Q9C037 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.27■□□□□ 0.83
TRIM4Q9C037 AC004854.2-201ENST00000608450 1441 ntBASIC20.27■□□□□ 0.83
TRIM4Q9C037 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
TRIM4Q9C037 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM4Q9C037 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.26■□□□□ 0.83
TRIM4Q9C037 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM4Q9C037 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM4Q9C037 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM4Q9C037 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM4Q9C037 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM4Q9C037 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM4Q9C037 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.26■□□□□ 0.83
TRIM4Q9C037 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM4Q9C037 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM4Q9C037 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.26■□□□□ 0.83
TRIM4Q9C037 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
TRIM4Q9C037 AC087239.1-201ENST00000622671 572 ntBASIC20.26■□□□□ 0.83
TRIM4Q9C037 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM4Q9C037 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM4Q9C037 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM4Q9C037 AC244015.2-201ENST00000616358 1861 ntBASIC20.26■□□□□ 0.83
TRIM4Q9C037 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
TRIM4Q9C037 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM4Q9C037 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.25■□□□□ 0.83
TRIM4Q9C037 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM4Q9C037 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM4Q9C037 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM4Q9C037 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM4Q9C037 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM4Q9C037 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
TRIM4Q9C037 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.25■□□□□ 0.83
TRIM4Q9C037 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM4Q9C037 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM4Q9C037 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
TRIM4Q9C037 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM4Q9C037 AC010141.3-201ENST00000456659 717 ntBASIC20.25■□□□□ 0.83
TRIM4Q9C037 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM4Q9C037 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.25■□□□□ 0.83
TRIM4Q9C037 AC008687.6-201ENST00000596318 630 ntBASIC20.25■□□□□ 0.83
TRIM4Q9C037 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
TRIM4Q9C037 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM4Q9C037 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
TRIM4Q9C037 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.25■□□□□ 0.83
TRIM4Q9C037 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM4Q9C037 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM4Q9C037 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.25■□□□□ 0.83
TRIM4Q9C037 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM4Q9C037 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM4Q9C037 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.25■□□□□ 0.83
TRIM4Q9C037 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM4Q9C037 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM4Q9C037 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
TRIM4Q9C037 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
TRIM4Q9C037 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM4Q9C037 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM4Q9C037 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM4Q9C037 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
TRIM4Q9C037 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms